DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG9406 and Calml3

DIOPT Version :10

Sequence 1:NP_611552.1 Gene:CG9406 / 37405 FlyBaseID:FBgn0034592 Length:186 Species:Drosophila melanogaster
Sequence 2:NP_001012054.1 Gene:Calml3 / 307100 RGDID:1305499 Length:149 Species:Rattus norvegicus


Alignment Length:157 Identity:48/157 - (30%)
Similarity:78/157 - (49%) Gaps:18/157 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly     8 NNELEEKIS---EAFCIFDTHGDKYIDSRNVGNVLRFLGCAPTEKEVEDVIKATD-----SVDYP 64
            |...||:|:   |||.:||..||..|.::.:|.|:|.||..|||.|::|::...|     :||:|
  Rat     3 NQLTEEQIAEFKEAFSLFDKDGDGCITTQELGTVMRSLGQNPTEAELQDMVNEIDKDGNGTVDFP 67

  Fly    65 GEAHLVKFMEHVSKLLMDRQMEPASSEKLLEAFETLDPENKKYLTKEYFGKLMAEEGEPFSAEEL 129
                  :|:..:|:.:.|..    |.|::.|||...|.:...:::......:|...||..|.||:
  Rat    68 ------EFLTMMSRKMKDTD----SEEEIREAFRVFDKDGNGFVSAAELRHVMTRLGEKLSDEEV 122

  Fly   130 DAMWPVAIDPITGHIPYTFYINQLRHK 156
            |.|...|.....|.:.|..:::.|..|
  Rat   123 DEMIQAADTDGDGQVNYEEFVHMLVSK 149

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG9406NP_611552.1 PTZ00184 7..156 CDD:185504 47/155 (30%)
Calml3NP_001012054.1 PTZ00184 1..149 CDD:185504 47/155 (30%)

Return to query results.
Submit another query.