DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG9406 and cmd-1

DIOPT Version :10

Sequence 1:NP_611552.1 Gene:CG9406 / 37405 FlyBaseID:FBgn0034592 Length:186 Species:Drosophila melanogaster
Sequence 2:NP_503386.1 Gene:cmd-1 / 178614 WormBaseID:WBGene00000552 Length:149 Species:Caenorhabditis elegans


Alignment Length:153 Identity:44/153 - (28%)
Similarity:76/153 - (49%) Gaps:18/153 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly    12 EEKIS---EAFCIFDTHGDKYIDSRNVGNVLRFLGCAPTEKEVEDVIKATD-----SVDYPGEAH 68
            ||:|:   |||.:||..||..|.::.:|.|:|.||..|||.|::|:|...|     ::|:|    
 Worm     7 EEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFP---- 67

  Fly    69 LVKFMEHVSKLLMDRQMEPASSEKLLEAFETLDPENKKYLTKEYFGKLMAEEGEPFSAEELDAMW 133
              :|:..:::.:.|..    |.|::.|||...|.:...:::......:|...||..:.||:|.|.
 Worm    68 --EFLTMMARKMKDTD----SEEEIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMI 126

  Fly   134 PVAIDPITGHIPYTFYINQLRHK 156
            ..|.....|.:.|..::..:..|
 Worm   127 READIDGDGQVNYEEFVTMMTTK 149

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG9406NP_611552.1 PTZ00184 7..156 CDD:185504 43/151 (28%)
cmd-1NP_503386.1 PTZ00184 1..149 CDD:185504 43/151 (28%)

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