DRSC/TRiP Functional Genomics Resources

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Protein Alignment Magi and TOM1

DIOPT Version :9

Sequence 1:NP_001286661.1 Gene:Magi / 37403 FlyBaseID:FBgn0034590 Length:1202 Species:Drosophila melanogaster
Sequence 2:NP_010745.3 Gene:TOM1 / 852068 SGDID:S000002865 Length:3268 Species:Saccharomyces cerevisiae


Alignment Length:545 Identity:93/545 - (17%)
Similarity:175/545 - (32%) Gaps:225/545 - (41%)


- Green bases have known domain annotations that are detailed below.


  Fly   393 QQMQEQRSKTPTALSETMPTEAAEAHEQEEDESPMKLPYKFTRNPAELQGQRINTTLLKSSRGLG 457
            ::|..::....:.::||||....:.   ..|..|:::   :..:|.: ..|:...|.:|:     
Yeast   896 EEMYIRQHMPDSVITETMPLPIVDV---SGDGPPLQI---YIDDPKK-GDQKGKITSVKT----- 948

  Fly   458 FTIVGSDGSAGGDVEEFLQIKTVVPNGPAWLDGQLQTGDVLVYVNDTCVLGYT--------HHDM 514
                          ...||::|::..        ||:...:::   .|.|..:        |.|:
Yeast   949 --------------RNTLQMRTILYT--------LQSNTAILF---RCFLRLSHSRNMDLEHKDL 988

  Fly   515 ---VNIFQSILPG--ERAALEVCRGYPLPF-----------------DPNDPNTEVVTTMAV--- 554
               |:||::::..  |........|: ||:                 .||  :||::.|:..   
Yeast   989 TTEVHIFENVVENVIEMLKATELEGH-LPYILVLLNFNTFVFTIPKASPN--STEILQTIPAYIF 1050

  Fly   555 ---DG------------RESDKQRRLNMDGNYNFLDLSGEGAKKTSGSGSGFILMKKPEIYTFSI 604
               .|            ....|.:.|:...|.|::|       :::|            |.|.|.
Yeast  1051 YQKGGYLLYLHIIRDLFTRMTKIKDLSSLDNINYID-------ESNG------------ILTLSC 1096

  Fly   605 MKGSMGFGFTIADSACGQIVKKILDRNCCTQLMEGDVLLEINGLNVRNKPHFYV-----VELLKE 664
            :..::.|                .:::..|:.||          ||::...:||     ..::| 
Yeast  1097 LINALTF----------------YNKSMQTETME----------NVQSIGKYYVSIDDDYNIMK- 1134

  Fly   665 CSQTTPTAVKIQRTPPDPPANNTLAQLNQVGNV---------AKLRKNFVGSGLFRSKTPTADLY 720
             :.|.|..|.......|...:::|.: .|..||         :.|:..|....::     |.:||
Yeast  1135 -ALTVPIKVMALAMILDLDKSDSLFK-TQSRNVPYSVFKQLLSMLKNIFTNVNIY-----TKELY 1192

  Fly   721 STQVKEVLPMRPKTPLVDTRRSRVQIQSPN----NEVDDEGD--------GAAAAER-------- 765
            ......:.|...|..|.:      |:..|.    |.:.|.||        |..:.|:        
Yeast  1193 ELHWDLIFPPIKKISLFE------QVGIPGDVAANYLTDTGDDLPADNSIGLFSPEQWEKYKKLI 1251

  Fly   766 ---------KPLQLQ-TQGKSNSSLQELDDIPYMDP-----------YPKI-------------- 795
                     :|:|.| .:|.|:..|.||.|..:.|.           |||:              
Yeast  1252 GEDKSIYYPQPMQAQYYKGCSSKELDELRDTFFNDGLPSRIFTVLPFYPKLVNAFAKTLLQIFTK 1316

  Fly   796 ---------SRLSERLAEVTLQGDA 811
                     .|:.:|:.|..|...|
Yeast  1317 YDEPTEVFAGRILDRILETDLDDPA 1341

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
MagiNP_001286661.1 WW 294..323 CDD:278809
WW 342..372 CDD:238122
PDZ 443..534 CDD:214570 16/103 (16%)
DegQ <455..534 CDD:223343 13/91 (14%)
PDZ_signaling 606..668 CDD:238492 9/66 (14%)
PDZ 925..1011 CDD:214570
PDZ_signaling 1029..1110 CDD:238492
TOM1NP_010745.3 DUF908 92..387 CDD:399185
DUF913 448..>683 CDD:399192
MSCRAMM_ClfB <1879..2061 CDD:411414
DUF4414 2328..2357 CDD:405126
HUL4 2385..3268 CDD:227354
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5021
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

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