DRSC/TRiP Functional Genomics Resources

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Protein Alignment Magi and Grip1

DIOPT Version :10

Sequence 1:NP_611551.1 Gene:Magi / 37403 FlyBaseID:FBgn0034590 Length:1202 Species:Drosophila melanogaster
Sequence 2:XP_038935886.1 Gene:Grip1 / 84016 RGDID:621667 Length:1171 Species:Rattus norvegicus


Alignment Length:947 Identity:188/947 - (19%)
Similarity:317/947 - (33%) Gaps:315/947 - (33%)


- Green bases have known domain annotations that are detailed below.


  Fly   400 SKTPTALSETMPTEAAEAHE----QEEDESPMKLPYKFTRN------------------PAELQG 442
            |:.|..|::|........||    ...||||      :|::                  |.|.:|
  Rat    36 SREPPDLNDTKGNVDQSPHELLAKPNSDESP------YTKSASQTKPPDGALAVRRQSIPEEFKG 94

  Fly   443 QRINTTLLKSSRGLGFTIVGSDGSAGGDVEEFLQIKTVVPNGPAWLDGQLQTGDVLVYVNDTCVL 507
            ..:...:.|....||.|:     |.|.|.:...::..:...|.|....||..||.:..||...:.
  Rat    95 STVVELMKKEGTTLGLTV-----SGGIDKDGKPRVSNLRQGGIAARSDQLDVGDYIKAVNGINLA 154

  Fly   508 GYTHHDMVNIFQSILPGERAALEVCRGYPLPFDPNDPNTEVVTTMAVDGRESDKQRRLNMDGNYN 572
            .:.|.:::::.:::  |||..|||  .|.||                                  
  Rat   155 KFRHDEIISLLKNV--GERVVLEV--EYELP---------------------------------- 181

  Fly   573 FLDLSGEGAKKTSGSGSGFILMKKPEIYTFSIMKGSMGFGFTIADSACGQIVKKILDRN------ 631
                      ..|..||. ::.:..|:   ::.|....|||.|...|..       |||      
  Rat   182 ----------PVSIQGSS-VMFRTVEV---TLHKEGNTFGFVIRGGAHD-------DRNKSRPVV 225

  Fly   632 -CCTQ----------LMEGDVLLEINGLNVRNKPHFYVVELLKECSQTTPTAVKIQRTPPDPPAN 685
             .|.:          :..||.||.::|:.:....|...:.:||:|.|.....::...:..|..|.
  Rat   226 ITCVRPGGPADREGTIKPGDRLLSVDGIRLLGTTHAEAMSILKQCGQEATLLIEYDVSVMDSVAT 290

  Fly   686 NTLAQLNQVGNVAKLRKNFVGSGLFRSKTPTADL---YSTQV---KEVLPM-RPKTPLVDTRRSR 743
            .:...|.:|                 :|||.|.|   .:|.|   |:|:.: :.|:..:..|...
  Rat   291 ASGPLLVEV-----------------AKTPGASLGVALTTSVCCNKQVIVIDKIKSASIADRCGA 338

  Fly   744 VQIQSPNNEVDDEGDGAAAAERKPLQLQTQGKSNSSLQELDDIPYMDPYPKISRLSERLAEVTLQ 808
            :.:          ||...:.:...::..|..::...|....|      ..|:..|......:.|:
  Rat   339 LHV----------GDHILSIDGTSMEYCTLAEATQFLANTTD------QVKLEILPHHQTRLALK 387

  Fly   809 GDANGGIYGMPPSMQPLPL-PLA----------HHESCYCYDCQAQRYR----------PGYFVQ 852
            |..:..|   ..|.:.||. |.|          ||...:...|:.....          |.....
  Rat   388 GPDHVKI---QRSDRQLPWDPWASSQCSVHTNHHHNPHHPDHCRVPALAFPKALTPNSPPAMVSS 449

  Fly   853 AQQAAMS---------GTTGQ--YSPLQTAHLQNERIQRR--VNELLSDRRRVGFANLDPPQQMQ 904
            :...:||         ||..:  ||......:...|::::  .:.|......||.|.     |:.
  Rat   450 SSPTSMSAYSLSSLNMGTLPRSLYSTSPRGTMMRRRLKKKDFKSSLSLASSTVGLAG-----QVV 509

  Fly   905 HSPSWRNGALLDVSEDADQCELTEVTLERQAL-GFGFRIVG---GTEE-GSQVTVGHIVPGGAAD 964
            |:                  |.|||.|....: |||.::.|   .||. .|...:.:|.....|:
  Rat   510 HT------------------ETTEVVLTADPVTGFGIQLQGSVFATETLSSPPLISYIEADSPAE 556

  Fly   965 QDQRINTGDEILSIDGINVLNSSHHKVVSLVGESALRGQVTMILRRRRTPLLQQAPVSTQLRRYP 1029
            :...:..||.:::|:||...:|:..:...|:.:|::..:||:.:.                    
  Rat   557 RCGVLQIGDRVMAINGIPTEDSTFEEANQLLRDSSITSKVTLEIE-------------------- 601

  Fly  1030 YDVIVS--------------RHENEGFGFVIISSSNHYYGS--TIGKLIPGSPADRCGELKVGDR 1078
            :||..|              :|..| .|..|.|.|:...|.  .|..:..||.|.|.|.|::||:
  Rat   602 FDVAESVIPSSGTFHVKLPKKHSVE-LGITISSPSSRKPGDPLVISDIKKGSVAHRTGTLELGDK 665

  Fly  1079 IVAVNRIEIAGMSHGDVVNLIKESGLHVRLTI------------------GVPLKE-GGPSPGGS 1124
            ::|::.|.:...|..|.|.::::....|:|.|                  .|.||. |||     
  Rat   666 LLAIDNIRLDSCSMEDAVQILQQCEDLVKLKIRKDEDNSDEQESSGAIIYTVELKRYGGP----- 725

  Fly  1125 SVGVS-SNTPLQASP----SLLKAQLSHQQ----------QLPQQHLQQAQLNHHHQHLEM---- 1170
             :|:: |.|.....|    ||.|..|:.:.          .:....|:...|:.....|:|    
  Rat   726 -LGITISGTEEPFDPIIISSLTKGGLAERTGAIHIGDRILAINSSSLKGKPLSEAIHLLQMAGET 789

  Fly  1171 ----------------PMSMPVPGHGSYL----ERPS 1187
                            |..:|:|.|.|.|    |.||
  Rat   790 VTLKIKKQTDAQPASSPKKLPIPSHSSDLGDGEEDPS 826

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
MagiNP_611551.1 WW 294..323 CDD:459800
WW 342..372 CDD:238122
PDZ1_MAGI-1_3-like 444..533 CDD:467213 22/88 (25%)
PDZ2_MAGI-1_3-like 597..677 CDD:467214 21/96 (22%)
PDZ3_MAGI-1_3-like 926..1010 CDD:467215 23/88 (26%)
PDZ4_MAGI-1_3-like 1029..1111 CDD:467216 27/115 (23%)
Grip1XP_038935886.1 PDZ1_GRIP1-2-like 96..178 CDD:467175 22/90 (24%)
PDZ2_GRIP1-2-like 193..281 CDD:467169 21/97 (22%)
PDZ3_GRIP1-2-like 293..378 CDD:467172 19/117 (16%)
PDZ4_GRIP1-2-like 507..607 CDD:467174 28/137 (20%)
PDZ5_GRIP1-2-like 615..699 CDD:467170 24/84 (29%)
PDZ6_GRIP1-2-like 712..796 CDD:467171 18/89 (20%)
PDZ7_GRIP1-2-like 1043..1127 CDD:467173
Blue background indicates that the domain is not in the aligned region.

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