DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Magi and GRIP2

DIOPT Version :9

Sequence 1:NP_001286661.1 Gene:Magi / 37403 FlyBaseID:FBgn0034590 Length:1202 Species:Drosophila melanogaster
Sequence 2:XP_011532443.1 Gene:GRIP2 / 80852 HGNCID:23841 Length:1050 Species:Homo sapiens


Alignment Length:831 Identity:173/831 - (20%)
Similarity:284/831 - (34%) Gaps:266/831 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly   437 PAELQGQRINTTLLKSSRGLGFTIVGSDGSAGGDVEEFLQIKTVVPNGPAWLDGQLQTGDVLVYV 501
            |.|.:|..:...:.|....||.||     |.|.|.:...::..:.|.|.|.....|..||.:..|
Human    47 PEEFRGITVVELIKKEGSTLGLTI-----SGGTDKDGKPRVSNLRPGGLAARSDLLNIGDYIRSV 106

  Fly   502 NDTCVLGYTHHDMVNIFQSILPGERAALEVCRGYPLPFDPNDPNTEVVTTMAVDGRESDKQRRLN 566
            |...:....|.:::.:.:::  |||..|||....|.|...|:|.   :.:..||           
Human   107 NGIHLTRLRHDEIITLLKNV--GERVVLEVEYELPPPAPENNPR---IISKTVD----------- 155

  Fly   567 MDGNYNFLDLSGEGAKKTSGSGSGFIL---------MKKPEIYTFSIMKGSMGFGFTIADSACGQ 622
                   :.|..|      |:..||:|         ..:|.:.|: :..|...            
Human   156 -------VSLYKE------GNSFGFVLRGGAHEDGHKSRPLVLTY-VRPGGPA------------ 194

  Fly   623 IVKKILDRNCCTQLMEGDVLLEINGLNVRNKPHFYVVELLKECSQTTPTAVKIQRTPPDPPANNT 687
                  ||.  ..|..||.||.::|:.:....|...:..|::||......|:.....||..||.:
Human   195 ------DRE--GSLKVGDRLLSVDGIPLHGASHATALATLRQCSHEALFQVEYDVATPDTVANAS 251

  Fly   688 LAQLNQVGNVAKLRKNFVGSGLFRSKTPTADLYSTQVKEVLPMRPKTPLVDTRRSRVQIQSPNNE 752
            ...:.::....       ||.|..|.|.|    |.:.|.|:.:           .|::   |.:.
Human   252 GPLMVEIVKTP-------GSALGISLTTT----SLRNKSVITI-----------DRIK---PASV 291

  Fly   753 VDDEGDGAAAAERKPLQLQTQGKSNSSLQELDDIPYMDPYPKISRLSERLAEVTLQGDANGGIYG 817
            ||  ..||.......|.:......:.||.|...:        ::.:||:   |.|:      |..
Human   292 VD--RSGALHPGDHILSIDGTSMEHCSLLEATKL--------LASISEK---VRLE------ILP 337

  Fly   818 MPPSMQPL----PLPLAHHESCYCYD-----CQAQRYRPGY---------FVQAQQAAMSGTTGQ 864
            :|.|.:||    .:.:...|..:.:|     |.:.  |||:         ..|.|..::|.|...
Human   338 VPQSQRPLRPSEAVKVQRSEQLHRWDPCVPSCHSP--RPGHCRMPTWATPAGQDQSRSLSSTPFS 400

  Fly   865 YSPLQTA-HLQNERIQRRVNELLSDRRRVG----------------FANLDPPQQMQHSPSWRNG 912
            ...|..| ...|.....|.::.:|.|..:|                .:.:.|..|:.|:      
Human   401 SPTLNHAFSCNNPSTLPRGSQPMSPRTTMGRRRQRRREHKSSLSLASSTVGPGGQIVHT------ 459

  Fly   913 ALLDVSEDADQCELTEVTLERQAL-GFGFRIVGG---TEE-GSQVTVGHIVPGGAADQDQRINTG 972
                        |.|||.|....| |||.::.||   ||. .|...|..|.|...|::...:..|
Human   460 ------------ETTEVVLCGDPLSGFGLQLQGGIFATETLSSPPLVCFIEPDSPAERCGLLQVG 512

  Fly   973 DEILSIDGINVLNSSHHKVVSLVGESALRGQVTMIL----------------------------- 1008
            |.:|||:||...:.:..:...|:.::||..:|.:.:                             
Human   513 DRVLSINGIATEDGTMEEANQLLRDAALAHKVVLEVEFDVAESVIPSSGTFHVKLPKKRSVELGI 577

  Fly  1009 ------RRRRTPL------------------------------LQQAPV--STQLRRYPYDVI-- 1033
                  |:|..||                              |...|:  :.|:.|...|::  
Human   578 TISSASRKRGEPLIISDIKKGSVAHRTGTLEPGDKLLAIDNIRLDNCPMEDAVQILRQCEDLVKL 642

  Fly  1034 -VSRHEN-----EGFGFVIISSSNHYYGSTIGKLIPGSP----------------ADRCGELKVG 1076
             :.:.|:     |..|.|..:.....||..:|..|.|:.                |:|.|.:.||
Human   643 KIRKDEDNSDELETTGAVSYTVELKRYGGPLGITISGTEEPFDPIVISGLTKRGLAERTGAIHVG 707

  Fly  1077 DRIVAVNRIEIAGMSHGDVVNLIKESGLHVRLTIG-------VPLKEGGPS 1120
            |||:|:|.:.:.|....:.::|::.:|..|.|.|.       :|.|.|..|
Human   708 DRILAINNVSLKGRPLSEAIHLLQVAGETVTLKIKKQLDRPLLPRKSGSLS 758

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
MagiNP_001286661.1 WW 294..323 CDD:278809
WW 342..372 CDD:238122
PDZ 443..534 CDD:214570 23/90 (26%)
DegQ <455..534 CDD:223343 22/78 (28%)
PDZ_signaling 606..668 CDD:238492 13/61 (21%)
PDZ 925..1011 CDD:214570 30/125 (24%)
PDZ_signaling 1029..1110 CDD:238492 25/104 (24%)
GRIP2XP_011532443.1 PDZ_signaling 53..135 CDD:238492 22/88 (25%)
PDZ_signaling 155..238 CDD:238492 22/127 (17%)
PDZ_signaling 253..336 CDD:238492 23/126 (18%)
PDZ_signaling 461..549 CDD:238492 28/87 (32%)
PDZ_signaling 562..645 CDD:238492 9/82 (11%)
PDZ_signaling 662..742 CDD:238492 20/79 (25%)
PDZ_signaling 947..1026 CDD:238492
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
10.910

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