DRSC/TRiP Functional Genomics Resources

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Protein Alignment Magi and Herc3

DIOPT Version :9

Sequence 1:NP_001286661.1 Gene:Magi / 37403 FlyBaseID:FBgn0034590 Length:1202 Species:Drosophila melanogaster
Sequence 2:NP_001348895.1 Gene:Herc3 / 73998 MGIID:1921248 Length:1050 Species:Mus musculus


Alignment Length:97 Identity:25/97 - (25%)
Similarity:38/97 - (39%) Gaps:29/97 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly   766 KPLQLQTQ--GKSNSSLQELDDI-----PYMDPYPKISRLSERLAEVTLQ----------GDANG 813
            :|.:|:..  |.||...:||::.     .|...:|.:....|...|..|:          |....
Mouse   926 QPAELRAMMVGNSNYDWEELEETAVYRGDYSSTHPTVKLFWETFHEFPLEKKKKFLLFLTGSDRI 990

  Fly   814 GIYGMPPSMQPL---------PLPLAHHESCY 836
            .|||| .|:|.:         .||:||  :||
Mouse   991 PIYGM-ASLQIIIQSTATGEEYLPVAH--TCY 1019

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
MagiNP_001286661.1 WW 294..323 CDD:278809
WW 342..372 CDD:238122
PDZ 443..534 CDD:214570
DegQ <455..534 CDD:223343
PDZ_signaling 606..668 CDD:238492
PDZ 925..1011 CDD:214570
PDZ_signaling 1029..1110 CDD:238492
Herc3NP_001348895.1 ATS1 2..331 CDD:227511
RCC1 313..377 CDD:366085
HECTc 702..1048 CDD:238033 25/97 (26%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5021
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

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