DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Magi and Ubr5

DIOPT Version :9

Sequence 1:NP_001286661.1 Gene:Magi / 37403 FlyBaseID:FBgn0034590 Length:1202 Species:Drosophila melanogaster
Sequence 2:XP_006520242.1 Gene:Ubr5 / 70790 MGIID:1918040 Length:2800 Species:Mus musculus


Alignment Length:1115 Identity:212/1115 - (19%)
Similarity:363/1115 - (32%) Gaps:316/1115 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 IITATTTSTAGGGAGVAA-----RGVATAKSPTDYLMLQQQQQQQQQQQQHF----------NSN 52
            ::||.|..:..|.:.|.|     ...:...|.:|    ....|....:|:.|          ||:
Mouse  1642 VVTAATAGSEAGASSVPAFFSEDDSQSNDSSDSD----SSSSQSDDIEQETFMLDEPLERTTNSS 1702

  Fly    53 H---FYQQQQPQQLAPLNASHQHQHSHPHPHPHPVAAATSFATFNGNSNLNSSLANGSSRKFNCS 114
            |   ..|..:..|.|..|..||...|.........||:::...:...|||..|....:|.....:
Mouse  1703 HANGAAQAPRSMQWAVRNPQHQRAASTAPSSTSTPAASSAGLIYIDPSNLRRSGTISTSAAAAAA 1767

  Fly   115 RDNVDDGGDAGEMAAASQTLSSAGTDVVGNGSGHGNGTVTGNGEKSGGLAPPGGHHLRPPPPPAL 179
                     |.|.:.||..|:||      :........|........||.|...|.:....|.|:
Mouse  1768 ---------ALEASNASSYLTSA------SSLARAYSIVIRQISDLMGLIPKYNHLVYSQIPAAV 1817

  Fly   180 KKSASAVIG--NSASREDVASLSGTSSLNSQMSVHNQFISGLPSNGIGSNGVHGGAATGRGGPPN 242
            |.:....:.  |....:.:.:.:...|:........::.|.|             |:.|..|.||
Mouse  1818 KLTYQDAVNLQNYVEEKLIPTWNWMVSVMDSTEAQLRYGSAL-------------ASAGDPGHPN 1869

  Fly   243 SILKGSKENLLQNTY----------YNGETGDSSLGSECGV----GDVQHQNH-----ESHDDPG 288
            ..|..|:.:..:...          ..|....:.|.:..|:    ||  ..|:     .||:|..
Mouse  1870 HPLHASQNSARRERMTAREEASLRTLEGRRRATLLSARQGMMSARGD--FLNYALSLMRSHNDEH 1932

  Fly   289 DGLGPLPPKWETAYTERGELYFIDHNTGTSHWLDPRLSKYQKKSLEDCCEDELPYGWEKIEDSMY 353
            ..:.|:                                      |:.|....:.|.::.:     
Mouse  1933 SDVLPV--------------------------------------LDVCSLKHVAYVFQAL----- 1954

  Fly   354 GMYFIDHVNRRTQYENPVLEAK--RRAAEQSQQQQQMQQQQQQMQEQRSKTPTALSETMPTEAAE 416
             :|:|..:|::|..:.|.||.|  |...|.....:..:.:......|.:.......:::|.|..:
Mouse  1955 -IYWIKAMNQQTTLDTPQLERKRTRELLELGIDNEDSEHENDDDTSQSATLNDKDDDSLPAETGQ 2018

  Fly   417 AHE--QEEDE---------SPMKLP----YKFTRNPAELQGQRINTTLL-KSSRGLGFTIVGSDG 465
            .|.  :..|.         :|.::|    ......|..||.......|. :.|:||..:..|| |
Mouse  2019 NHPFFRRSDSMTFLGCIPPNPFEVPLAEAIPLADQPHLLQPNARKEDLFGRPSQGLYSSSAGS-G 2082

  Fly   466 SAGGDVEEFLQIKTVVPNGPAWL---------------DGQLQTGDVLVYVNDTCVLGYTHHDMV 515
            ....:|........|:|...::.               :|:.|:  :|....|:...|.:..|:.
Mouse  2083 KCIVEVTMDRNCLEVLPTKMSYAANLKNVMNMQNRQKKEGEEQS--LLAEEADSSKPGPSAPDVA 2145

  Fly   516 NIFQSILPGERAALEVCRGYPL-PFDPNDPNTEVVTTMAVDGRESDKQRRLNMDGNYNF-LDLSG 578
            ...:|.|..| ..|....|.|| .|.|......:|.:..:            :.|.:.. |:|.|
Mouse  2146 AQLKSSLLAE-IGLTESEGPPLTSFRPQCSFMGMVISHDM------------LLGRWRLSLELFG 2197

  Fly   579 EGAKKTSGSGSGFILMKKPEIYTFSIMKGSMGFGFTIADSACGQIVKKILDRNCCTQLME----- 638
            ....:..|:..|.||.:             :| ||.:.:|...:.::|:.::......:|     
Mouse  2198 RVFMEDVGAEPGSILTE-------------LG-GFEVKESKFRREMEKLRNQQSRDLSLEVKVDR 2248

  Fly   639 -GDVLLEINGLNVRNKPHFYVVELLKECSQTTPTAV-KIQRTPPDPPANNTLAQLNQVGNVAKLR 701
             .|:|::.....:.|  ||.     :.|: |||.|| :::.|..|.|..                
Mouse  2249 DRDLLIQQTMRQLNN--HFG-----RRCA-TTPMAVHRVKVTFKDEPGE---------------- 2289

  Fly   702 KNFVGSGLFRSKTPTADLYSTQVKEVLPMRPKTPLVDTRRSRVQIQSPN--------NEVDDEGD 758
                |||:.||       :.|.:.:......|.|.:|.      ||:.|        ..:.:.|:
Mouse  2290 ----GSGVARS-------FYTAIAQAFLSNEKLPNLDC------IQNANKGTHTSLMQRLRNRGE 2337

  Fly   759 GAAAAERKPLQLQTQGKSNSSLQELDDIPYMDPYPKISRLSERLAEVTLQGDANGGIYGMPPSMQ 823
            .....||:....::.|....|.::.|    .|...::| :..|......:|:         ||..
Mouse  2338 RDREREREREMRRSSGLRAGSRRDRD----RDFRRQLS-IDTRPFRPASEGN---------PSDD 2388

  Fly   824 PLPLPLAHHESCYCYDCQAQRYRPGYFVQAQQAAM-SGTTGQYSPLQTAHL-----QNERIQRRV 882
            |.||| ||.::.      .:|..|.  |||.|.|. |..||....|..|.|     ..:.::.||
Mouse  2389 PDPLP-AHRQAL------GERLYPR--VQAMQPAFASKITGMLLELSPAQLLLLLASEDSLRARV 2444

  Fly   883 NELLSDRRRVGFANLDPPQQMQHSPSWRNGA-------LLDVSEDADQCELTEVTLERQALGFGF 940
            :|.:               ::..:....|||       |||.||        :|...|:..|...
Mouse  2445 DEAM---------------ELIIAHGRENGADSILDLGLLDSSE--------KVQENRKRHGSSR 2486

  Fly   941 RIVG----GTEEGSQVTV--------GHIVPGGAADQDQRINTGDEILSIDGINVLNS------- 986
            .:|.    .|::|.....        |...|....:.:.|:|....|..|.|:.:|.:       
Mouse  2487 SVVDMDLEDTDDGDDNAPLFYQPGKRGFYTPRPGKNTEARLNCFRNIGRILGLCLLQNELCPITL 2551

  Fly   987 SHHKVVSLVG 996
            :.|.:..|:|
Mouse  2552 NRHVIKVLLG 2561

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
MagiNP_001286661.1 WW 294..323 CDD:278809 0/28 (0%)
WW 342..372 CDD:238122 6/29 (21%)
PDZ 443..534 CDD:214570 20/106 (19%)
DegQ <455..534 CDD:223343 18/93 (19%)
PDZ_signaling 606..668 CDD:238492 12/67 (18%)
PDZ 925..1011 CDD:214570 17/91 (19%)
PDZ_signaling 1029..1110 CDD:238492
Ubr5XP_006520242.1 CUE_UBR5 184..230 CDD:270606
ZnF_UBR1 1177..1244 CDD:197698
PolyA 2391..2454 CDD:197769 21/86 (24%)
HECTc 2469..2797 CDD:214523 21/101 (21%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5021
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

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