DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Magi and Wwp2

DIOPT Version :9

Sequence 1:NP_001286661.1 Gene:Magi / 37403 FlyBaseID:FBgn0034590 Length:1202 Species:Drosophila melanogaster
Sequence 2:NP_080106.1 Gene:Wwp2 / 66894 MGIID:1914144 Length:870 Species:Mus musculus


Alignment Length:334 Identity:81/334 - (24%)
Similarity:119/334 - (35%) Gaps:79/334 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly    98 NLNSSLANGSSR------KFNCSRDNVDDGGDAGEMAAASQTLSSAGTDV----VGNGSGHGNGT 152
            ||::.|.|...:      ..|...:|.......||:     |:...|..|    |.|||...:|:
Mouse   102 NLSNVLKNNGGKMENTQLTLNLQTENKGSVVSGGEL-----TIFLDGPTVDLGSVPNGSAVTDGS 161

  Fly   153 VTGNGEKSGGLAPPGGHHLRPPPPPALKKSASAVIGNSASREDVASLSGTSSLNSQMSV-----H 212
            ...:.|.||....|...| :||       |.:...|.|.:.......:.|::..|:.|.     |
Mouse   162 QPPSRESSGTAIAPETRH-QPP-------STNCFGGRSRTHRHSGGSARTATAASEQSPGARNRH 218

  Fly   213 NQFISGLPSNGIGSNGVHGGAATGRGGPPNSILKG------------SKENL----LQNTYYNGE 261
            .|.:....|:|: :||......|....|..|.:.|            |..|.    .|:|...||
Mouse   219 RQPVKNSSSSGL-ANGTVNEEPTPASEPEESSVVGVTSLPAAALSVSSNPNTTSLPAQSTPAEGE 282

  Fly   262 TGDSSLGSECGVGDVQHQNHESHDDPGDGLGP--LPPKWETAYTERGELYFIDHNTGTSHWLDPR 324
            ...:| |::              ..|.....|  ||..||......|.:|::||||.|:.|    
Mouse   283 EASTS-GTQ--------------QLPAAAQAPDALPAGWEQRELPNGRVYYVDHNTKTTTW---- 328

  Fly   325 LSKYQKKSLEDCCEDELPYGWEKIEDSMYGMYFIDHVNRRTQYENPVLEAKRRAAEQSQQQQQMQ 389
                         |..||.||||..|.....|::||..|.|.::.|..|..|...:...|:.|:|
Mouse   329 -------------ERPLPPGWEKRTDPRGRFYYVDHNTRTTTWQRPTAEYVRNYEQWQSQRNQLQ 380

  Fly   390 QQQQQMQEQ 398
            ...|...::
Mouse   381 GAMQHFSQR 389

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
MagiNP_001286661.1 WW 294..323 CDD:278809 12/28 (43%)
WW 342..372 CDD:238122 12/29 (41%)
PDZ 443..534 CDD:214570
DegQ <455..534 CDD:223343
PDZ_signaling 606..668 CDD:238492
PDZ 925..1011 CDD:214570
PDZ_signaling 1029..1110 CDD:238492
Wwp2NP_080106.1 C2_E3_ubiquitin_ligase 17..142 CDD:175988 9/44 (20%)
PRK07003 <149..>299 CDD:235906 37/173 (21%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 150..300 37/173 (21%)
WW 302..331 CDD:366073 13/45 (29%)
WW 332..361 CDD:366073 12/28 (43%)
WW 407..435 CDD:366073
WW 447..477 CDD:238122
HECTc 516..868 CDD:238033
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5021
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

Return to query results.
Submit another query.