DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Magi and wwc3

DIOPT Version :9

Sequence 1:NP_001286661.1 Gene:Magi / 37403 FlyBaseID:FBgn0034590 Length:1202 Species:Drosophila melanogaster
Sequence 2:NP_001103940.1 Gene:wwc3 / 566492 ZFINID:ZDB-GENE-070209-229 Length:1148 Species:Danio rerio


Alignment Length:1001 Identity:204/1001 - (20%)
Similarity:330/1001 - (32%) Gaps:320/1001 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly   293 PLPPKWETAYTERGELYFIDHNTGTSHWLDPRLSKYQKKSLEDCCEDELPYGWEKIEDSMYGMYF 357
            ||||.||.|....|.:::|||||..:.|:|||....:..:..||..||||.|||.:.|...|:|:
Zfish    16 PLPPGWEEARDYDGRVFYIDHNTRQTSWIDPRDRITKPLTFADCVGDELPLGWEVVYDQQVGVYY 80

  Fly   358 IDHVNRRTQYENPVLEAKRRAAEQSQQQQQMQQQQQQMQEQRSKTPTALSE--TMPTEAAEAHEQ 420
            |||:|:.||.|||              :.|.:|:|::|          |.|  .:..||..|.::
Zfish    81 IDHINKTTQIENP--------------RTQWRQEQERM----------LKEYLVVAQEALNAKKE 121

  Fly   421 EEDESPMKLPYKFTRNPAELQGQRI---NTTLLKSSRGLGFTIVGSDGSAGGDVEEFLQIKTVVP 482
                     .|:..:...||..|.:   |......:|.:..:..||..:|..|.:   |||..: 
Zfish   122 ---------MYQIKQQRLELAQQEMQLFNQLTQDDNRSITSSHSGSSSNAKYDPD---QIKAEI- 173

  Fly   483 NGPAWLDGQLQTGDVLVYVNDTCVLGYTHHDMVNIFQSILPGERAALEVCRGYPLPFDPNDPNTE 547
                                 .|     ..:.::..:..|...|..|:.            ....
Zfish   174 ---------------------AC-----RRERLSRLKQELAQMRQELQY------------KEMG 200

  Fly   548 VVTTMAVDGRESDKQRRLNMD-GNYNFLDLSGEGAKKTSGSGSGFILMKKPEIYTFSIMKGSMGF 611
            |.|...:|.:.|..|....:| ....|.:|  ...||...:|.     |:.:....|:.|.::.|
Zfish   201 VETLQEIDRKMSSSQTNYKLDEAQAIFSEL--RSIKKAISTGE-----KERQDLIQSLAKLTLNF 258

  Fly   612 ----------GFTIADSACGQIVKKILDRNCCTQLM------EGDVLLEINGLNVRNKPHFYVVE 660
                      ..::||| |.  |::..|..|.|.||      |..:|.:      |.|..:...|
Zfish   259 CDSINEVTNNAESLADS-CS--VQQYTDAGCQTDLMGEFGSQESSLLAD------RVKLSWQYEE 314

  Fly   661 LLKECSQTTPTAVKIQRTPPDPPANNTLAQLNQV--GNVAKLRKNFVGSGLFRSKTPTADLYSTQ 723
            ..|:.|       .||         :.||||:..  ...|:..:::....|.|.|       .|.
Zfish   315 AKKKMS-------SIQ---------HQLAQLDSESWSGRAEADRDWDCLQLLREK-------ETL 356

  Fly   724 VKEVLPMRPKTPLVDTRRSRVQIQSPNNEVDDEGDGAAAAERKPL--QLQTQGKSNSSLQELDDI 786
            ::|:..:..:....||   .:|:|.....:.||...|.:|:.:..  ::..|.|.|..:::|::.
Zfish   357 LQELTLLSQQQHSSDT---LLQLQEEKRRLQDEVQRAHSAQSQGANQRILLQEKRNVLMRQLEEA 418

  Fly   787 PYMDPYPKISRLSERLAEVTLQGDANGG-----------------------IYGMP--------- 819
            ..:..|......|...:.:|:...::.|                       |||:|         
Zfish   419 TRITTYLHSQLKSLSASNLTVSSSSSRGSLASSRGSLASSRGSLSSVSFTDIYGLPQYDRTEGSS 483

  Fly   820 ----PSMQPLPLPLAHHESCYCYDCQAQRYRPGYFVQAQQAAMSGTTGQYSPLQTAHLQNERIQR 880
                ||.:.| |||..|.                         ||:.  |.|        :|...
Zfish   484 DVLDPSFRYL-LPLESHS-------------------------SGSA--YGP--------KRSHD 512

  Fly   881 RVNELLSDRRRVGFANLDPPQQMQHSPSWRNGALLDVSEDADQCELTEVTLERQALGFGFRIVGG 945
            ....|.|...|...::|.||.....:|      .....:|....::||..:|..:.|.   :..|
Zfish   513 TPQSLTSLSSRSSLSSLSPPSSPMDTP------YHSAPQDCPLAQMTEEYMEVASRGL---LAEG 568

  Fly   946 TEEGSQVTVGHIVPGGAADQDQRINTGDEILSIDGINVLNSSHHKVVSLVGESALRGQVTMILRR 1010
            ....||           |.|...::...|:......::|....|:..:|.|..:..|........
Zfish   569 LRTQSQ-----------AQQHTTLSGDGEVGIAATAHLLEGKSHRDAALQGTHSSTGVTLRCKSA 622

  Fly  1011 RRTPLLQQAPVSTQLRRYP----YDVIVS------------RHENEGFGF-----VIISSSNHYY 1054
            .||        |.:.||..    .||:.:            ..|:|...|     |.:|...|. 
Zfish   623 SRT--------SRRARRVSAGVNEDVLATDSGVFEAWSRSRTEESEEVSFAQDVTVAVSEPVHI- 678

  Fly  1055 GSTIGKLIPGSPADRCGELKVGDRIVAVNRIEIAGMSHGDVVNLIK------------------- 1100
              .||.|...:           .|.:.::.:::..:|...:.:..|                   
Zfish   679 --QIGLLYDSN-----------SRFLLLHVLQMRNLSKASIRDRWKVFVKVHVLPMDSSRPCTYY 730

  Fly  1101 -------ESGLHVRLTIGVPLKEGGPSPGGSSVGVSSNTPLQASPSLLKAQLS-----------H 1147
                   :|.|....:..:||..|||........:|:..||.....|..||:|           .
Zfish   731 CCKAQEPQSLLSFNESFRIPLSVGGPGAHALQFSLSTLGPLAQEELLGSAQVSLTDCVGSTEMLF 795

  Fly  1148 QQQLPQQHLQQAQLNH--HHQHLEMP 1171
            |....|.|..:   ||  .|:.|..|
Zfish   796 QWLKVQFHSTE---NHRPEHRRLSQP 818

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
MagiNP_001286661.1 WW 294..323 CDD:278809 13/28 (46%)
WW 342..372 CDD:238122 16/29 (55%)
PDZ 443..534 CDD:214570 14/93 (15%)
DegQ <455..534 CDD:223343 11/78 (14%)
PDZ_signaling 606..668 CDD:238492 19/77 (25%)
PDZ 925..1011 CDD:214570 15/85 (18%)
PDZ_signaling 1029..1110 CDD:238492 16/127 (13%)
wwc3NP_001103940.1 WW 17..46 CDD:278809 13/28 (46%)
WW 64..93 CDD:278809 15/28 (54%)
C2_Kibra 677..800 CDD:176062 22/136 (16%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5021
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.900

Return to query results.
Submit another query.