DRSC/TRiP Functional Genomics Resources

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Protein Alignment Magi and trip12

DIOPT Version :9

Sequence 1:NP_001286661.1 Gene:Magi / 37403 FlyBaseID:FBgn0034590 Length:1202 Species:Drosophila melanogaster
Sequence 2:XP_005159283.1 Gene:trip12 / 564866 ZFINID:ZDB-GENE-041111-262 Length:2096 Species:Danio rerio


Alignment Length:1072 Identity:183/1072 - (17%)
Similarity:308/1072 - (28%) Gaps:385/1072 - (35%)


- Green bases have known domain annotations that are detailed below.


  Fly    10 STAGGGAGVAARGVATAKSPTDYLMLQQQQQQQQQQQQHFNSNHFYQQQQPQQLAPLNASHQHQH 74
            |..||....:.|..|.|: |.|:.:..:.|.:|..|:                   .|:..:::.
Zfish     7 SNPGGSLRRSQRNTAAAQ-PIDHTLAGRLQPEQVNQK-------------------ANSPPENRR 51

  Fly    75 SHPHPHPHPVAAATSFATFNGNSNLNSSLANGSSRKFNCSRDNVDDGGDAGEMAAASQTLSSAGT 139
            |:......|.::|..:|  .|:::..:||:.                 ..|.::.....|.:|||
Zfish    52 SNSKASKAPPSSAVGYA--RGHTSRRNSLSL-----------------SVGSLSIPDPDLEAAGT 97

  Fly   140 DVVGNGSGHGNGTVT------------------------------GNGEKSGGLAP--------- 165
               ....|...|:.|                              .:...||..||         
Zfish    98 ---SGQQGRREGSSTRALKRSSVSEPNITFSPSPAKRPKVVSSHFSDSSASGPSAPAISPEVTEP 159

  Fly   166 ---PGGHHLR---------PPPPPALKKSASAVIGNSAS---------REDVASLSGTSSLNSQM 209
               |.....:         |.|..||.|.:|:..|.|.:         :.|...||.:||     
Zfish   160 RKAPASVSTKSKKRRLAAEPAPARALSKKSSSYPGPSGASSTPSQKRKKADATLLSSSSS----- 219

  Fly   210 SVHNQFISGLPSNGIGSNGVHGGAATGRGGPPNSILKGSKENLLQNTYYNGETGDSSLGSECGVG 274
                   |.|||:...:..:...:...|...|..:...|..        :.:.|.|::.......
Zfish   220 -------SSLPSSSSAAGPLPPRSEASRAAKPTKLASKSAA--------SAKAGCSTVTDSSSSS 269

  Fly   275 DVQHQNHESHDDPGDGLGPLPPKWETAYTERGELYFIDHNTGTSHWLDPRLSKYQKKSLEDCCED 339
            .....:..|......|.....|  :.|..::|:.......:.::....||.|...|       |.
Zfish   270 ASSSSSSSSSSSAATGTNSCAP--QGARLKQGKDQSKARRSRSASSPSPRRSSRDK-------EQ 325

  Fly   340 ELPYGWEKIEDSMYGMYFIDHVNRRTQYENPVLEAKRRAAEQSQQQQQMQQQQQQMQEQRSKTPT 404
            ....|..|.:       :....|.:.....|.|.....|..::..:......|.::...|..|..
Zfish   326 SKAAGSSKFD-------WASRFNSKVNLPKPKLSLPGSAKAETSSKPGPSGLQAKLASLRKSTKK 383

  Fly   405 ALSETMPTE------------------------------AAEAHEQEE----DESPMKLPYKFTR 435
            . ||:.|.|                              ||||..||:    |.:.........|
Zfish   384 R-SESPPAELPSCRRSTRQKTTGSCASTSRRGSGLGKRGAAEARRQEKMADSDNNQDGANSSAAR 447

  Fly   436 NPAELQGQRINTTLLKSSRGLGFTIVG---SDGSAGGDVEEFLQIKTVVPN-----GPAW----- 487
            .....||...::::   :..:|.|..|   ||.|..|.::..|:.:.:.|:     ||..     
Zfish   448 TEETPQGASASSSV---AGAVGMTTSGESESDDSEMGRLQALLEARGLPPHLFGPFGPRMSQLFH 509

  Fly   488 --------------LDGQLQTGD-------------VLVYVNDTCVLGYTHHDMVNIFQSILPGE 525
                          |.|...|||             :||..|:..:.|:.       .:|::|..
Zfish   510 RTIGSGASSKAQQLLQGLQATGDESQQLQAAIEMCQLLVMGNEETLGGFP-------VKSVVPAL 567

  Fly   526 RAALEVCRGYPLPFDPNDPNTEVVTTMAVDGRES-----------DKQRRLNMDGNYNFLD---- 575
            ...|::...:.:   .|..:..:...|....|.|           :|.:.:      .|:|    
Zfish   568 ITLLQMEHNFDI---MNHASRALTYMMEALPRSSAVVVDAIPVFLEKLQVI------QFIDVAEQ 623

  Fly   576 -------LSGEGAKKTSGSGSGFILMKKPEIYTFSIMKGSMGFGFTIADSACGQIV--------- 624
                   ||...:|....:|.....:...|.::.:..:.::    .||.:.|..|.         
Zfish   624 ALTALEMLSRRHSKAILQAGGLADCLLYLEFFSINAQRNAL----AIAANCCQSITPDEFHFVAD 684

  Fly   625 -------------KKILDRNC-C---------------TQLMEGDVLLEINGLNVRNKP------ 654
                         ||.::..| |               .|:...|:|..|..|.|...|      
Zfish   685 SLPLLTQRLTHQDKKSVESTCLCFARLVDNFQHEENLLQQVASRDLLTNIQQLLVLTPPVLSSGM 749

  Fly   655 HFYVVELLK-ECSQTTPTAVKIQRTPPDPPANNTLAQLNQVGNVAK-LRKNFVGSG--------- 708
            ...||.:.. .||.....||::.:.                 |:|: ||....|:.         
Zfish   750 FIMVVRMFSLMCSNCPCLAVQLMKQ-----------------NIAETLRFLLCGASNGSCQEQID 797

  Fly   709 -LFRSKTPTADLYSTQVKEVLPMRPKTPLVDTRRSRVQIQSPNNEVDDEGDGAAAAERKPLQLQT 772
             :.||.....:|.|. :.|::|..|:                      ||..|..|..|....||
Zfish   798 LVPRSPQELYELTSL-ICELMPCLPR----------------------EGIFAVDAMLKKGSAQT 839

  Fly   773 QGKSNSSLQELDDIPYMDPYPKISRLSERLAEVTLQGDAN-------GGIY-------------- 816
              ...:..|..||.....||   :|:..|:.|...|...:       |.:|              
Zfish   840 --TEGAIWQWRDDRGLWHPY---NRIDSRIIETAHQNGEDEISLSTLGRVYTIDFNSMQQINEDT 899

  Fly   817 GMPPSMQPLPLPLAH-----HESCYCYDCQAQ 843
            |...::|..|.|||:     |......|.:||
Zfish   900 GTARAIQRKPNPLANPNTGGHLEVRREDARAQ 931

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
MagiNP_001286661.1 WW 294..323 CDD:278809 3/28 (11%)
WW 342..372 CDD:238122 4/29 (14%)
PDZ 443..534 CDD:214570 23/130 (18%)
DegQ <455..534 CDD:223343 23/118 (19%)
PDZ_signaling 606..668 CDD:238492 19/106 (18%)
PDZ 925..1011 CDD:214570
PDZ_signaling 1029..1110 CDD:238492
trip12XP_005159283.1 WWE 842..907 CDD:280915 12/67 (18%)
HECTc 1693..2094 CDD:238033
HECTc 1711..2090 CDD:214523
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5021
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.900

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