DRSC/TRiP Functional Genomics Resources

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Protein Alignment Magi and ube3b

DIOPT Version :9

Sequence 1:NP_001286661.1 Gene:Magi / 37403 FlyBaseID:FBgn0034590 Length:1202 Species:Drosophila melanogaster
Sequence 2:NP_001108154.1 Gene:ube3b / 556864 ZFINID:ZDB-GENE-060526-231 Length:1069 Species:Danio rerio


Alignment Length:115 Identity:28/115 - (24%)
Similarity:44/115 - (38%) Gaps:38/115 - (33%)


- Green bases have known domain annotations that are detailed below.


  Fly   892 VGFANLDPPQQMQHSPSWRNGALLDVSEDADQCELTEVTLERQALGFGFRIVGGTEEGSQVTVGH 956
            :|||.|.||..::         .::||:|.|    |..||.....||             .|:..
Zfish   986 LGFAYLKPPFSIR---------CVEVSDDQD----TGDTLGSVLRGF-------------FTIRK 1024

  Fly   957 IVPGGAADQDQRINTGDEILSIDGINVLNSSHHKVVSLVGESALRGQVTM 1006
            ..|||      |:.|     |....|:|...::...|::.:. ||..::|
Zfish  1025 KEPGG------RLPT-----SSTCFNLLKLPNYSKKSILRDK-LRYAISM 1062

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
MagiNP_001286661.1 WW 294..323 CDD:278809
WW 342..372 CDD:238122
PDZ 443..534 CDD:214570
DegQ <455..534 CDD:223343
PDZ_signaling 606..668 CDD:238492
PDZ 925..1011 CDD:214570 18/82 (22%)
PDZ_signaling 1029..1110 CDD:238492
ube3bNP_001108154.1 IQ 28..50 CDD:197470
HECTc 683..1067 CDD:238033 28/115 (24%)
HECTc 708..1066 CDD:214523 28/115 (24%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5021
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.900

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