DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Magi and Magi1

DIOPT Version :10

Sequence 1:NP_611551.1 Gene:Magi / 37403 FlyBaseID:FBgn0034590 Length:1202 Species:Drosophila melanogaster
Sequence 2:XP_038964101.1 Gene:Magi1 / 500261 RGDID:1586025 Length:1491 Species:Rattus norvegicus


Alignment Length:1125 Identity:367/1125 - (32%)
Similarity:497/1125 - (44%) Gaps:370/1125 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly   228 GVHGGAATGRGGPP--------------NSILKGSKENLLQNTYYNGETGDSSLGSECGVGDVQH 278
            |.:.|...|...||              :|:..|||::..:.|        .|.......|.|..
  Rat   180 GTYEGNYYGTPKPPSQPVSGKVITTDALHSLQSGSKQSTPKRT--------KSYNDMQNAGIVHT 236

  Fly   279 QNHESHD--------------------------------------DPG------------DGLGP 293
            :|.|..|                                      ||.            |.|||
  Rat   237 ENEEEEDVPEMNSSFTADSGDQDEPTLQEATLPPVNSSALAAPITDPSQKFPQYLPLSAEDNLGP 301

  Fly   294 LPPKWETAYTERGELYFIDHNTGTSHWLDPRLSKYQKKSLEDCCED-------------ELPYGW 345
            ||..||.||||.||:|||||||.|:.|||||....|:|.||:|.:|             |||.||
  Rat   302 LPENWEMAYTENGEVYFIDHNTKTTSWLDPRCLNKQQKPLEECEDDEEGVHTEELDSELELPAGW 366

  Fly   346 EKIEDSMYGMYFIDHVNRRTQYENPVLEAKR-RAAEQSQQQQQMQQQQQQMQEQRSKTPTALSET 409
            |||||.:||:|::||:||:|||||||||||| |..||.|||||.|||.||.|..:.:..|....:
  Rat   367 EKIEDPVYGVYYVDHINRKTQYENPVLEAKRKRQLEQQQQQQQHQQQPQQPQPPQPEEWTEDHAS 431

  Fly   410 MPTEAAEAHEQEEDESPMKLPYK----FTRNPAELQGQRINTTLLKSSRGLGFTIVGSDGSAGGD 470
            :....|.:|.....|...:.|.:    |||||:||:|:.|:|.|.|||||.|||:||.|     :
  Rat   432 VVPPVAPSHPPSNPEPAREAPLQGKPFFTRNPSELKGKFIHTKLRKSSRGFGFTVVGGD-----E 491

  Fly   471 VEEFLQIKTVVPNGPAWLDGQLQTGDVLVYVNDTCVLGYTHHDMVNIFQSILPGERAALEVCRGY 535
            .:||||||::|.:|||.|||:::||||:|.||||||||:||..:|.|||||..|....||:||||
  Rat   492 PDEFLQIKSLVLDGPAALDGKMETGDVIVSVNDTCVLGHTHAQVVKIFQSIPIGASVDLELCRGY 556

  Fly   536 PLPFDPNDPNTEVVTTMA--------VDGRE--------SDKQRRLNMDGNYNFLDL-SGEGAKK 583
            ||||||:||||.:||::|        |:|:|        |.|..:::     |..|. ....|..
  Rat   557 PLPFDPDDPNTSLVTSVAILDKEPIIVNGQETYDSPASHSSKTGKVS-----NMKDARPSSPADV 616

  Fly   584 TSGSGSGF---------ILMKKPEIYTFSIMKGSMGFGFTIADS--ACGQIVKKILDRNCCTQLM 637
            .|.|..|:         .:..:||:.|..|:||.||||||||||  ..||.||:|:|...|..|.
  Rat   617 ASNSSHGYPNDTVSLASSIATQPELITVHIVKGPMGFGFTIADSPGGGGQRVKQIVDSPRCRGLK 681

  Fly   638 EGDVLLEINGLNVRNKPHFYVVELLKECSQTTPTAVKIQR--------TPPDPPANNTLAQLNQV 694
            |||:::|:|..||:...|..||::|.||.:.:...:.:||        :|...|.....:|.:..
  Rat   682 EGDLIVEVNKRNVQALTHNQVVDMLIECPKGSEVTLLVQRGGLPVPKKSPKSQPLERKDSQNSSQ 746

  Fly   695 GNVAKLRKNFVGSGLFRSKTPTADLYSTQVKEVLPMRPKTPLVDTRRSRVQIQSPNNEVDDEGDG 759
            .:|:.||.       ..:.:|:   :|.||      .|:.|..|       :.:|     |:.|.
  Rat   747 HSVSSLRS-------LHTASPS---HSAQV------LPEYPPAD-------VPAP-----DQTDS 783

  Fly   760 AAAAERKPLQLQTQGKSNSSLQELDDIPYMDPYPKISRLSERLAEVTLQGDANGGIYGMPPSMQP 824
            :...:..|.::..|.:|                                      :|...| |.|
  Rat   784 SGQKKPDPFKIWAQSRS--------------------------------------MYENRP-MSP 809

  Fly   825 LPLPLAHHESCYCYDCQAQRYRPGYFVQAQQAAMSGTTGQYSPLQTAHLQNERIQRRVNELLSDR 889
            .|                               .||.:           :.|| .|.:|      
  Rat   810 SP-------------------------------ASGLS-----------KGER-DREIN------ 825

  Fly   890 RRVGFANLDPPQQMQHSPSWRNGALLDVSEDADQCEL-----TEVTLERQALGFGFRIVGGTEEG 949
                                        |.:..:|::     .::.|.|:..||||||:||.|.|
  Rat   826 ----------------------------STNFGECQIPDYQEQDIFLWRKETGFGFRILGGNEPG 862

  Fly   950 SQVTVGHIVPGGAADQDQRINTGDEILSIDGINVLNSSHHKVVSLVGESALRGQVTMILRR---- 1010
            ..:.:|||||.||||.|.|:.:|||::.:||..|:..||..||.|:.::|.:|.|.:.:||    
  Rat   863 EPIYIGHIVPLGAADTDGRLRSGDELICVDGTPVIGKSHQLVVQLMQQAAKQGHVNLTVRRKVVF 927

  Fly  1011 ----------------------------RRTPLLQQ------------------------APVST 1023
                                        :|||...|                        ..||.
  Rat   928 TVPKAENEVPSPASSHHSSNQPASLTEEKRTPQGSQNSLNTVSSGSGSTSGIGSGGGGGSGVVSA 992

  Fly  1024 QLRRYPYDVIVSRHENEGFGFVIISS-SNHYYGST------------IGKLIPGSPADRCGELKV 1075
            .|:  ||||.:.|.|||||||||:|| |....|:|            ||::|.||||||||:|||
  Rat   993 VLQ--PYDVEIRRGENEGFGFVIVSSVSRPEAGTTFAGNACVAMPHKIGRIIEGSPADRCGKLKV 1055

  Fly  1076 GDRIVAVNRIEIAGMSHGDVVNLIKESGLHVRLTIGVPLKEGGPSPGGSSVGVSSNTPLQASPSL 1140
            ||||:|||...|...||.|:||||||:|..|.|.|         .||..|   |:.|.|..:..:
  Rat  1056 GDRILAVNGCSITNKSHSDIVNLIKEAGNTVTLRI---------IPGDES---SNATLLTNAEKI 1108

  Fly  1141 LKAQLSHQQQLPQQHLQQAQ 1160
            .....:|...  ||..|:.:
  Rat  1109 ATITTTHAPS--QQGTQETR 1126

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
MagiNP_611551.1 WW 294..323 CDD:459800 20/28 (71%)
WW 342..372 CDD:238122 21/29 (72%)
PDZ1_MAGI-1_3-like 444..533 CDD:467213 51/88 (58%)
PDZ2_MAGI-1_3-like 597..677 CDD:467214 37/81 (46%)
PDZ3_MAGI-1_3-like 926..1010 CDD:467215 37/88 (42%)
PDZ4_MAGI-1_3-like 1029..1111 CDD:467216 53/94 (56%)
Magi1XP_038964101.1 PDZ0_MAGI-1_3-like 14..103 CDD:467212
NK 122..293 CDD:450170 18/120 (15%)
WW 302..331 CDD:459800 20/28 (71%)
WW 362..393 CDD:197736 22/30 (73%)
PDZ1_MAGI-1_3-like 470..554 CDD:467213 51/88 (58%)
PDZ2_MAGI-1_3-like 639..722 CDD:467214 38/82 (46%)
MAGI_u5 728..805 CDD:465224 20/142 (14%)
PDZ3_MAGI-1_3-like 839..923 CDD:467215 37/83 (45%)
PDZ4_MAGI-1_3-like 996..1092 CDD:467216 54/104 (52%)
PDZ5_MAGI-1_3-like 1150..1232 CDD:467217
Blue background indicates that the domain is not in the aligned region.

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