DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Magi and CG5087

DIOPT Version :9

Sequence 1:NP_001286661.1 Gene:Magi / 37403 FlyBaseID:FBgn0034590 Length:1202 Species:Drosophila melanogaster
Sequence 2:NP_648279.1 Gene:CG5087 / 39035 FlyBaseID:FBgn0035953 Length:1078 Species:Drosophila melanogaster


Alignment Length:699 Identity:120/699 - (17%)
Similarity:218/699 - (31%) Gaps:262/699 - (37%)


- Green bases have known domain annotations that are detailed below.


  Fly   345 WEKIEDS-------MYGMYFIDHVNRRTQ----------YENPVLE-------------AKRRAA 379
            |.|::.:       :.|||:. .:|..:|          |.:.||.             ..:...
  Fly   459 WRKLDSAEVVQVSRICGMYYA-ALNTLSQMKLDILTGICYSDNVLYDIWLLITSLGPNCGMKEYL 522

  Fly   380 EQSQQQQQMQQQQQQMQ----EQRSKTPTALSETMPTEAAEAHEQEEDESPMKLPYKFTRNPAEL 440
            |..:.:..:|:.|..|.    :..:...|.|.|         ||...:::|.||      |...|
  Fly   523 ELLKSETNLQKPQTAMLMLFCDCMTHYVTILDE---------HEMYTEQNPFKL------NDYVL 572

  Fly   441 QGQRINTTLLKSSRGLGFTIVGSDGSAGGD--VEE--FLQIKTVV----------PNGPA--WLD 489
            ....:|..|.|        ::..:..||..  |:.  ||.:.|::          |..|.  ||.
  Fly   573 LTYFLNNILYK--------LINDNLLAGAKNIVQHPVFLSLHTLMLCLYRRDCRRPFTPPKHWLI 629

  Fly   490 GQLQTGDVLVYVND--------TCVLG-----YTHHDMVNIFQSILPGERAAL----EVCRGYPL 537
            .:::..   .::||        ..:|.     ..|.|.|.:|:..:..|:|.:    ..|.    
  Fly   630 PEVKPS---TFINDLEKAKRNAMLLLAKMPHIIPHEDRVKLFRKFVQNEKAVMGLTESACA---- 687

  Fly   538 PFDPNDPNTEVVTTMAVDGRESDKQRRLNMDGNYNFLDLSGEGAKKTSGSGSGFILMKKPEIYTF 602
                 .|.:.::..         .:.|:..|| |..|      |.:.:.:..|.|.::      |
  Fly   688 -----SPRSALIVI---------HRDRIVEDG-YRQL------AAQPTQALKGVIRVR------F 725

  Fly   603 SIMKGSMGFGFT---IADSACGQIVKKILDRNCCTQLMEGDVLLEINGLNVRNKPHFYVVELLKE 664
            ...:|....|..   :......:.:||:.|.:                           :.|.|.
  Fly   726 INQQGLHEAGIDQDGVFKEFLEETIKKVFDPS---------------------------LNLFKT 763

  Fly   665 CSQTTPTAVKIQRTPPDPPA---NNTLAQLNQVGNVAKLRKNFVGSGLFRS---KTPTADLYSTQ 723
            .|.        ||..|.|.:   :|.|.....||.:       :|..::..   ..|.|..:.:|
  Fly   764 TSD--------QRLYPSPISYVQDNHLELFEFVGRM-------LGKAVYEGIVVDVPFASFFLSQ 813

  Fly   724 V-----KEVLPMRPKTPLVDTR--RSRVQIQSPNNEVDD-----EGDGAAAAERKPLQLQTQGKS 776
            :     :.:.....:.|.:|..  ||...|:....:|.|     ..|.....:...|.|...||:
  Fly   814 LLGQTQQALYSCMDELPSLDNELYRSLTFIKHYKQDVSDLNLTFSVDQDVMGKIVTLALHPGGKA 878

  Fly   777 NSSLQELDDIPYMDPYPKISRLSERLAEVTLQGDANGGIYGM----------PPSMQPL------ 825
            . .:.:.:.:.|:. |.....::.::.|.|:.  .|.|...:          ||.:|.|      
  Fly   879 R-VVNDHNKLVYIH-YMAFFHMNTQIREQTIA--FNRGFRSIVNPEWLSLFSPPELQRLISGDTS 939

  Fly   826 PLPL---------------AHHESCYCYDCQAQRYRPGYFVQAQQAAMSG--TTGQYSPLQTAHL 873
            ||.|               .|...|:.:|..|:.     |.:.::.....  |:....||     
  Fly   940 PLDLKDLQKHTHYYGGFHDTHQVVCWLWDILAKD-----FTEEERKLFLKFVTSCSKPPL----- 994

  Fly   874 QNERIQRRVNELLSDRRRVGFANLDPPQQMQHSPSWRNGALLDVSEDAD 922
                              :|||:|:||..::         .::||:|.|
  Fly   995 ------------------LGFAHLEPPFSIR---------CVEVSDDED 1016

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
MagiNP_001286661.1 WW 294..323 CDD:278809
WW 342..372 CDD:238122 8/43 (19%)
PDZ 443..534 CDD:214570 23/123 (19%)
DegQ <455..534 CDD:223343 20/111 (18%)
PDZ_signaling 606..668 CDD:238492 8/64 (13%)
PDZ 925..1011 CDD:214570
PDZ_signaling 1029..1110 CDD:238492
CG5087NP_648279.1 HECTc 694..1076 CDD:238033 72/428 (17%)
HECTc 718..1075 CDD:214523 66/388 (17%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5021
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
10.900

Return to query results.
Submit another query.