DRSC/TRiP Functional Genomics Resources

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Protein Alignment Magi and Yap1

DIOPT Version :9

Sequence 1:NP_001286661.1 Gene:Magi / 37403 FlyBaseID:FBgn0034590 Length:1202 Species:Drosophila melanogaster
Sequence 2:XP_006242550.1 Gene:Yap1 / 363014 RGDID:1306035 Length:491 Species:Rattus norvegicus


Alignment Length:517 Identity:113/517 - (21%)
Similarity:173/517 - (33%) Gaps:189/517 - (36%)


- Green bases have known domain annotations that are detailed below.


  Fly   152 TVTGNGEKSGGLAPPGGH---HLR---------------------------------------PP 174
            :|:..|..:...|||.||   |:|                                       ||
  Rat    20 SVSPAGTPAAPPAPPAGHQVVHVRGDSETDLEALFNAVMNPKTANVPQTVPMRLRKLPDSFFKPP 84

  Fly   175 PPPALKKSASAVIGNSA--SREDVASLSGTSSLNSQMSVHNQFISG-LPSNGIGSNGVHGGAATG 236
            .|.:..:.||...|.:.  :.:.|.:.|..:||        |..:| |.::|:    |.|.|||.
  Rat    85 EPKSHSRQASTDAGTAGALTPQHVRAHSSPASL--------QLGAGTLTASGV----VSGPAATP 137

  Fly   237 RGGPPNSILKGSKENLLQNTYYNGETGDSSLGSECGVGDVQHQNHESHDDPGDGLGPLPPKWETA 301
            .                                      .||....|.:.|.|  .|||..||.|
  Rat   138 A--------------------------------------AQHLRQSSFEIPDD--VPLPAGWEMA 162

  Fly   302 YTERGELYFIDHNTGTSHWLDPRLSKYQK------------KSLEDCCEDELPYGWEKIEDSMYG 354
            .|..|:.||::||..|:.|.|||.:...:            ::|.:.....||.|||:.......
  Rat   163 KTSSGQRYFLNHNDQTTTWQDPRKAMLSQLNVPTSASPAVPQTLMNSASGPLPDGWEQAMTQDGE 227

  Fly   355 MYFIDHVNRRTQYENPVLEAK-RRAAEQ----------------------------SQQQQQMQQ 390
            :|:|:|.|:.|.:.:|.|:.: .:|..|                            |.||||:|.
  Rat   228 VYYINHKNKTTSWLDPRLDPRFGKAMNQRITQSAPVKQPPPLAPQSPQGGVLGGGSSNQQQQIQL 292

  Fly   391 QQQQMQEQRSK----------TPTALSETMPTEAAEAHEQE---EDESPMKLPYKFTRNPAELQG 442
            ||.||:::|.:          .|.|:....|:.|.....||   ..:.|.......|:|.....|
  Rat   293 QQLQMEKERLRLKQQELFRQVRPQAIRNINPSTANAPKCQELALRSQLPSLEQDGGTQNAVSSPG 357

  Fly   443 --QRINTTLLKSSRGLGFTIVGSDGSAGGDVEEFLQIKTV-VPNGP-AWLDG--QLQTGDVLVYV 501
              |.:.|....||.  .|...|:..|.....:..|.:.:. :|..| .:|:.  ::.|||     
  Rat   358 MTQELRTMTTNSSD--PFLNSGTYHSRDESTDSGLSMSSYSIPRTPDDFLNSVDEMDTGD----- 415

  Fly   502 NDTCVLGYTHHDMVNIFQSILPGERAALEVCRGYP-----LPFDPNDPNTEVVTTMAVDGRE 558
                          .|.||.||.:::.      :|     ||....|..|.....|.::|.|
  Rat   416 --------------TISQSTLPSQQSR------FPDYLEALPGTNVDLGTLEGDAMNIEGEE 457

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
MagiNP_001286661.1 WW 294..323 CDD:278809 13/28 (46%)
WW 342..372 CDD:238122 10/29 (34%)
PDZ 443..534 CDD:214570 19/94 (20%)
DegQ <455..534 CDD:223343 15/82 (18%)
PDZ_signaling 606..668 CDD:238492
PDZ 925..1011 CDD:214570
PDZ_signaling 1029..1110 CDD:238492
Yap1XP_006242550.1 WW 156..185 CDD:238122 13/28 (46%)
WW 213..245 CDD:197736 11/31 (35%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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