DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Magi and HUWE1

DIOPT Version :9

Sequence 1:NP_001286661.1 Gene:Magi / 37403 FlyBaseID:FBgn0034590 Length:1202 Species:Drosophila melanogaster
Sequence 2:NP_001285288.1 Gene:HUWE1 / 32510 FlyBaseID:FBgn0030674 Length:5151 Species:Drosophila melanogaster


Alignment Length:1090 Identity:215/1090 - (19%)
Similarity:326/1090 - (29%) Gaps:400/1090 - (36%)


- Green bases have known domain annotations that are detailed below.


  Fly    99 LNSSLANGSSRKFNCSRDNVDDGGD---------------AGEMAAASQT-----LSSA--GTDV 141
            :|:| .:||:.:.| ..|.|||..|               :|..||.::.     |.|.  .|..
  Fly  2882 VNAS-GDGSANRTN-PDDEVDDEDDDVDADPDGDPDVDPISGPSAAQAEAYLYERLGSGLMPTPP 2944

  Fly   142 VG-----NGS------GHGNGTVTGNGEKSGGLAPPGGHHLRPPPPPALKKSASAVIGNSASRED 195
            ||     |.|      ...||...|:|..:|.....||...|           |:..|.:||...
  Fly  2945 VGFRVRMNSSIAQPLDIDVNGGNAGSGSNAGATGSSGGSGQR-----------SSTGGTTASIGA 2998

  Fly   196 VASLSGTSSLNSQMSVHNQF--ISGLPSNGIGSNGVHGGAATG---------------RGGPPNS 243
            :||.:...|..|.|:....|  |||..|: :||....||.|.|               .||.|.|
  Fly  2999 IASAALRPSSGSWMAPDFNFIRISGGDSS-MGSGPAIGGNANGGDMNVFITPSMSLERAGGAPGS 3062

  Fly   244 ILKGSKENLLQNTYYNGETGDSSLGSECGVGDV--------QHQNHESHDDPGDGLGPLPPKWET 300
               |...:.|.|....|..|....||..|||.|        ||.|                  .|
  Fly  3063 ---GQTMSELLNEQPTGAGGGGGGGSASGVGGVGANGGTTGQHPN------------------AT 3106

  Fly   301 AYTE--RGELYFID---------HNTGTS------------HWLDPRLSKYQKKSLEDCCEDELP 342
            ..|.  |..|.::|         |...|.            ||.....:....:|..|.|     
  Fly  3107 LCTNGVRRRLLYLDQQYCVCMPTHQNPTEETQMETFTQDALHWWLEEATLLDMESQTDAC----- 3166

  Fly   343 YGWEKIEDSMYGMYFIDHVNRRTQYENPVLEAKRRAAEQSQQQQQMQQQQ------QQMQEQRSK 401
                     :|..:|:          .|.|..:.:||.|.::|::..:|.      .......|.
  Fly  3167 ---------LYAAHFL----------LPHLIKELKAAHQQRKQEEAARQSTTPASGSNASATSSS 3212

  Fly   402 T--------PTALSETMPTEAAEAHEQEEDESPMKLPYKFTRNPAELQ---GQR-------INTT 448
            |        |||.|.......|.|.......|.:.:|      |....   |.|       |::|
  Fly  3213 TTSVVGTAAPTATSSIASGLLANAVSAGSGSSSLVVP------PVAASATGGTRRSSIPVLISST 3271

  Fly   449 LLKSSRGLGFTIVGSDGSA------GGDVEEFLQI------KTVVPNGPAWLDGQLQTGDVLVYV 501
            |..||.....:..|:..::      ||....|..:      :|.....|....|.|:....|.: 
  Fly  3272 LGPSSASSATSATGNGATSDATTTTGGPTRNFSSVDSNVSSETQTTTRPPRQRGGLRQQSQLPF- 3335

  Fly   502 NDTCVLGYTHHDMVNIFQSI-LPGERAALEVCRGYPLPFDPNDPNTEVVTTMAVDGRESDKQRRL 565
                          ||:..| |..|:.:            ..|.:|...|..|.||.||..|...
  Fly  3336 --------------NIYAEIDLTNEQDS------------EGDRSTSTTTGTAADGAESQSQHNS 3374

  Fly   566 NMDG------------NYNFLDLSGEGAK-KTSGSGSGFILMKKPEIYTFSIMKGSMGFGFTIAD 617
            :...            ....|..||..:: .|....:..:|::..:....:.::||.  |.|.:.
  Fly  3375 SSTAAQVAVPQHQRHPPVPLLPSSGRPSRPHTRLDETELLLLQLTDRQIRNRLQGSS--GHTNSS 3437

  Fly   618 SACGQIVKKILDRNCCTQLMEGDVLLEINGLNVRNKPHFYVVELLKECSQ----------TTPTA 672
            ...|..:                    ||....|:.|         .|.|          ..|:|
  Fly  3438 RTSGSAL--------------------INARPNRDLP---------ACLQRHDHPAGSIFPRPSA 3473

  Fly   673 VKIQRTP-------PDPPANNTLAQLNQVG-NVAKLRKNF-----------VGSGLFRSKTPTAD 718
               .|||       |.|.:|..|.|||... :|.:..:||           |..|:.  ..|..:
  Fly  3474 ---NRTPAPTLVSMPTPMSNAALEQLNVTAPDVVRTDRNFALPSSLEVDVDVLPGIV--DLPQQE 3533

  Fly   719 LYSTQVKEVLPMRPKTPLVDT-----------------RRSRVQIQSP----------------- 749
            ......:.:||..|..|..||                 ..:|.:..:|                 
  Fly  3534 AQPEDDQLLLPPPPPPPPSDTTPLVHAEDDLWPGTVVSAGTREESSAPAVATESTEAVNESNQPE 3598

  Fly   750 ----NNEVDDEGDGAAAAERKPLQ--------------------LQTQGKSNSSLQELD------ 784
                ::|.......|.:||..||:                    ..|.|.|.::....|      
  Fly  3599 PTPESSESTSPNPQAPSAEPTPLEPGAAVDASVGAQTPATTEEAASTAGASGTTATITDMSPEVR 3663

  Fly   785 ------DIPY-MDP-----------------YPKISRLSERLAEVTLQGDANGGIYGMPPSMQPL 825
                  ::|. :||                 :.::.|:.:|..:..:|...:..:...|..:..|
  Fly  3664 AALGDLEVPEGVDPSFLAALPSEMREEVIQEHLRMQRIRQRAQQNAIQIAHDSLVEVNPEFLAAL 3728

  Fly   826 PLPLAHHESCYCYDCQAQRYRPGYFVQAQQAAMSGTTGQYSPLQT-AHLQN--ERIQRRVNELLS 887
            ||           :.|::........|.:|||.  |.....|:.| |..||  |.:::.:   |:
  Fly  3729 PL-----------NIQSEVLMQQRIEQQRQAAQ--TANPEDPVDTAAFFQNLPENLRQAI---LT 3777

  Fly   888 DRRRVGFANLDP-----PQQMQHSPSWRNGALLDVSEDADQCELTEVTLE 932
            |......|:|.|     .|.::.....||||.:|....::.....:.||:
  Fly  3778 DMEESQIASLPPELAAEAQFLRRDWESRNGARMDAHPPSNALSRFQTTLQ 3827

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
MagiNP_001286661.1 WW 294..323 CDD:278809 9/51 (18%)
WW 342..372 CDD:238122 3/29 (10%)
PDZ 443..534 CDD:214570 20/110 (18%)
DegQ <455..534 CDD:223343 14/91 (15%)
PDZ_signaling 606..668 CDD:238492 11/71 (15%)
PDZ 925..1011 CDD:214570 2/8 (25%)
PDZ_signaling 1029..1110 CDD:238492
HUWE1NP_001285288.1 DUF908 90..326 CDD:283630
DUF913 621..989 CDD:283642
UBA_like_SF 1467..1506 CDD:304366
WWE 1756..1828 CDD:128922
40S_SA_C 3575..3651 CDD:292740 11/75 (15%)
DUF4414 3675..3779 CDD:291075 22/119 (18%)
HECTc 4796..5149 CDD:238033
HECTc 4820..5148 CDD:214523
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5021
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
10.900

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