DRSC/TRiP Functional Genomics Resources

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Protein Alignment Magi and Wwtr1

DIOPT Version :9

Sequence 1:NP_001286661.1 Gene:Magi / 37403 FlyBaseID:FBgn0034590 Length:1202 Species:Drosophila melanogaster
Sequence 2:NP_001020040.1 Gene:Wwtr1 / 295062 RGDID:1559609 Length:395 Species:Rattus norvegicus


Alignment Length:419 Identity:87/419 - (20%)
Similarity:141/419 - (33%) Gaps:126/419 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly   163 LAPPGG-----------------HHLRPPPPPALKKSASAVIGNSASRE-DVASLSGTSSLNSQM 209
            |.|||.                 :.:..|.|.:.:|.   ::..|..:| |..|.|..||.:|. 
  Rat    10 LPPPGQQVIHVTQDLDTDLEALFNSVMNPKPSSWRKK---ILPESFFKEPDSGSHSRQSSTDSS- 70

  Fly   210 SVHNQFISGLPSNGIGSNGVHGGAATGRGGPPNSILKGSKENLLQNTYYNGETGDSSLGSECGV- 273
                                        ||.|...|.|..:::..::    ......||:..|. 
  Rat    71 ----------------------------GGHPGPRLAGGAQHVRSHS----SPASLQLGTGAGAA 103

  Fly   274 -GDVQHQNH--ESHDDPGDGLGPLPPKWETAYTERGELYFIDHNTGTSHWLDPRLSKYQKKSLE- 334
             |..|...|  :...|..|.| ||||.||..:|..|:.||::|....:.|.|||  |...:.|. 
  Rat   104 GGPAQQHAHLRQQSYDVTDEL-PLPPGWEMTFTATGQRYFLNHIEKITTWQDPR--KVMNQPLNH 165

  Fly   335 -----DCCEDELPYGWEKIEDSMYGMYFIDHVNRRT----------QYENP---VLEAKRRAAEQ 381
                 ......:|.....:......|   :|.:::.          ..:||   ::........|
  Rat   166 VNLHPTITSTSVPQRSMAVSQPNLAM---NHQHQQVVATSLSPQNHPAQNPPTGLMSVPNALTTQ 227

  Fly   382 SQQQQQMQQQQQQMQEQRSKTPTALSETMPTEAAEAHE---QEEDESPMKLP------YKFTRNP 437
            .||||:::.|:.||:.:|.:  ....|.|..|||...:   :.|..:|:..|      ...|.:.
  Rat   228 QQQQQKLRLQRIQMERERIR--MRQEELMRQEAALCRQLPMETETMAPVNTPAMNTDMRSVTNSS 290

  Fly   438 AE--LQGQRINTTLLKSSRGLGFTIVGSDGSAGGDVEEFLQIKTVVPNG---------------- 484
            ::  |.|...::....:..|||....    |.....|:||.....:..|                
  Rat   291 SDPFLNGGPYHSREQSTDSGLGLGCY----SVPTTPEDFLSNMDEMDTGENSGQTPMTVNPQQTR 351

  Fly   485 -PAWLD---------GQLQTGDVLVYVND 503
             |.:||         |.|::.|::...||
  Rat   352 FPDFLDCLPGTNVDLGTLESEDLIPLFND 380

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
MagiNP_001286661.1 WW 294..323 CDD:278809 11/28 (39%)
WW 342..372 CDD:238122 5/42 (12%)
PDZ 443..534 CDD:214570 16/87 (18%)
DegQ <455..534 CDD:223343 16/75 (21%)
PDZ_signaling 606..668 CDD:238492
PDZ 925..1011 CDD:214570
PDZ_signaling 1029..1110 CDD:238492
Wwtr1NP_001020040.1 WW 125..156 CDD:197736 13/30 (43%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5021
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

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