DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Magi and Ube3a

DIOPT Version :9

Sequence 1:NP_001286661.1 Gene:Magi / 37403 FlyBaseID:FBgn0034590 Length:1202 Species:Drosophila melanogaster
Sequence 2:NP_001380595.1 Gene:Ube3a / 22215 MGIID:105098 Length:870 Species:Mus musculus


Alignment Length:561 Identity:111/561 - (19%)
Similarity:180/561 - (32%) Gaps:171/561 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly   242 NSILKGSKENLLQNTYYNGETGDSSLGSECGVGDVQHQNHESHDDPGDGLGPLP----------- 295
            ::|:..||  .|:..||....|          |||. .||...||.    .|:|           
Mouse   361 DAIVAASK--CLKMVYYANVVG----------GDVD-TNHNEEDDE----EPIPESSELTLQELL 408

  Fly   296 ---------PKWETAYTERGELYFIDHNTGTSHWLDPRLS--KYQKKSLEDCCEDELPYGWEKIE 349
                     |:.:...||.|        ..|.....|.:|  ::..:.|.|..|.:..|.:.|:|
Mouse   409 GDERRNKKGPRVDPLETELG--------VKTLDCRKPLISFEEFINEPLNDVLEMDKDYTFFKVE 465

  Fly   350 DS-----MYGMYFIDHV--NRRTQYENPV-LEAKRRAAEQSQQQQQMQQQQQQMQEQRSKTPTAL 406
            ..     |...:.::.|  |....|:|.: :.::||..    ....:.|.||.....|.|.    
Mouse   466 TENKFSFMTCPFILNAVTKNLGLYYDNRIRMYSERRIT----VLYSLVQGQQLNPYLRLKV---- 522

  Fly   407 SETMPTEAAEAHEQEEDESPMKLPYKFTRNPAELQGQRINTTLLKSSRGLGFTIVGSDG-SAGGD 470
                      ..:...|::.::|......|||:|:.|            |.....|..| ..||.
Mouse   523 ----------RRDHIIDDALVRLEMIAMENPADLKKQ------------LYVEFEGEQGVDEGGV 565

  Fly   471 VEEFLQIKTVVPNGP-------------AWL-------DGQLQ-TGDVL---VYVNDTCVLGYTH 511
            .:||.|:.......|             .|.       :||.. .|.||   :|.|  |:|. .|
Mouse   566 SKEFFQLVVEEIFNPDIGMFTYDEATKLFWFNPSSFETEGQFTLIGIVLGLAIYNN--CILD-VH 627

  Fly   512 HDMVNIFQSILPGERAALEVCRGYPLPFDPNDPNTEVVTTMAVDGRESDKQRRLNMDGNYNFLDL 576
            ..|| :::.::..:....::...:|:.:.......|...::..|...:.:..:.::.||....||
Mouse   628 FPMV-VYRKLMGKKGTFRDLGDSHPVLYQSLKDLLEYEGSVEDDMMITFQISQTDLFGNPMMYDL 691

  Fly   577 SGEGAK--KTSGSGSGFILMKKPEIYTFSIMKGSMGF--GFTIADS----------------ACG 621
            ...|.|  .|:.:...|:.:....|...|:.|....|  ||.:..:                .||
Mouse   692 KENGDKIPITNENRKEFVNLYSDYILNKSVEKQFKAFRRGFHMVTNESPLKYLFRPEEIELLICG 756

  Fly   622 QIVKKILDRNCCTQLMEGDVLLEINGLNVRNK---------PHFYVVELLKECSQ-TTPTAVKIQ 676
                   .||...|.:|...  |.:|...|..         .|.:..|..:...| ||.|    .
Mouse   757 -------SRNLDFQALEETT--EYDGGYTRESVVIREFWEIVHSFTDEQKRLFLQFTTGT----D 808

  Fly   677 RTPPDPPANNTLAQLNQVGNVAKLRKNFVGSGLFRSKTPTA 717
            |.|              ||.:.||:.....:|....:.||:
Mouse   809 RAP--------------VGGLGKLKMIIAKNGPDTERLPTS 835

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
MagiNP_001286661.1 WW 294..323 CDD:278809 6/48 (13%)
WW 342..372 CDD:238122 8/37 (22%)
PDZ 443..534 CDD:214570 23/115 (20%)
DegQ <455..534 CDD:223343 22/103 (21%)
PDZ_signaling 606..668 CDD:238492 16/89 (18%)
PDZ 925..1011 CDD:214570
PDZ_signaling 1029..1110 CDD:238492
Ube3aNP_001380595.1 AZUL 27..81 CDD:406862
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 171..223
HECTc 518..868 CDD:238033 72/375 (19%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5021
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

Return to query results.
Submit another query.