DRSC/TRiP Functional Genomics Resources

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Protein Alignment Magi and Nedd4

DIOPT Version :9

Sequence 1:NP_001286661.1 Gene:Magi / 37403 FlyBaseID:FBgn0034590 Length:1202 Species:Drosophila melanogaster
Sequence 2:NP_001344927.1 Gene:Nedd4 / 17999 MGIID:97297 Length:1207 Species:Mus musculus


Alignment Length:683 Identity:143/683 - (20%)
Similarity:221/683 - (32%) Gaps:208/683 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly    50 NSNHFYQQQQPQQLAP----LNASHQHQH-SHPHPHPHP----------VAAATSFATFNGNSNL 99
            |.:......|.::|.|    |:......| .|| |.|.|          |...|.:         
Mouse   533 NGSEDENADQAEELEPGWVVLDQPDAATHLPHP-PEPSPLPPGWEERQDVLGRTYY--------- 587

  Fly   100 NSSLANGSSRKFNCSRDNVDD---GGDAGEMAAASQ----TLSSAGTDVVG--NGSGHGNGTVT- 154
                .|..||:....|.:.||   ..|..:|...:|    |......||.|  |.....|..:. 
Mouse   588 ----VNHESRRTQWKRPSPDDDLTDEDNDDMQLQAQRAFTTRRQISEDVDGPDNRESPENWEIVR 648

  Fly   155 --GNGEKSGGL--APPGGH-----HLRPPPPPALKKSASAVIGNSASREDVASLSGTSSLNSQMS 210
              .|.|.||..  :||.||     ||.......|     ||.||.|:.:.|.|.:.:|       
Mouse   649 EDENTEYSGQAVQSPPSGHIDVQTHLAEEFNTRL-----AVCGNPATSQPVTSSNHSS------- 701

  Fly   211 VHNQFISGLPSNGIGSNGVHGGAATGRGGPPNSILKGSKENLLQNTYYNGE-TGDSSLGSECGVG 274
                                      |||.            ||...:..: |....|.:..|  
Mouse   702 --------------------------RGGS------------LQTCIFEEQPTLPVLLPTSSG-- 726

  Fly   275 DVQHQNHESHDDPGDGLGPLPPKWETAYTERGELYFIDHNTGTSHWLDPRLSKYQKKSLEDCCED 339
                               |||.||....:||..|::|||:.|:.|..|.:....:..:......
Mouse   727 -------------------LPPGWEEKQDDRGRSYYVDHNSKTTTWSKPTMQDDPRSKIPAHLRG 772

  Fly   340 E--------LPYGWEKIEDSMYGMYFIDHVNRRTQYENPVLEAKRRAAEQSQQQQQMQQQQQQMQ 396
            :        ||.|||:...:...::||:|..::||:|:|.|:............:..:::.:..:
Mouse   773 KTDSNDLGPLPPGWEERTHTDGRVFFINHNIKKTQWEDPRLQNVAITGPAVPYSRDYKRKYEFFR 837

  Fly   397 EQRSKTPTALSETMPTEAAEAHEQEEDESPMKLPYKFTR-NPAELQGQRI----NTTLLKSSRGL 456
            .:..|                    :.:.|.|...|..| |..|...:||    ...|||:...:
Mouse   838 RKLKK--------------------QTDIPNKFEMKLRRANILEDSYRRIMGVKRADLLKARLWI 882

  Fly   457 GFTIVGSDGSAGGDV-----EEFLQIKTVVPNGPAWLDGQLQTGDVLVYVNDTCVLGYTHHDMVN 516
            .|     ||..|.|.     |.|..|...:.|....|.....|.:..:.:|...  |..:.|.::
Mouse   883 EF-----DGEKGLDYGGVAREWFFLISKEMFNPYYGLFEYSATDNYTLQINPNS--GLCNEDHLS 940

  Fly   517 IFQSILPGERAALEVCRGYPL------PF------------DPNDPNTEVVTTM--AVDGRESDK 561
            .|:.|  |..|.:.|..|..|      ||            |....::|..:::  .::...::.
Mouse   941 YFKFI--GRVAGMAVYHGKLLDGFFIRPFYKMMLQKLITLHDMESVDSEYYSSLRWILENDPTEL 1003

  Fly   562 QRRLNMDGNYNFLDLSGEGAKKTSGSGSGFILM----KKPEIYTF-------SIMKGSMGF--GF 613
            ..|..:|.     :|.|:..:....:|...|::    ||..||..       .|.|....|  ||
Mouse  1004 DLRFIIDE-----ELFGQTHQHELKTGGSEIVVTNKNKKEYIYLVIQWRFVNRIQKQMAAFKEGF 1063

  Fly   614 TIADSACGQIVKKILDRNCCTQLMEGDVLLEIN 646
            .   ....|.:.||.|.|....||.|...:::|
Mouse  1064 F---ELIPQDLIKIFDENELELLMCGLGDVDVN 1093

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
MagiNP_001286661.1 WW 294..323 CDD:278809 13/28 (46%)
WW 342..372 CDD:238122 11/29 (38%)
PDZ 443..534 CDD:214570 24/99 (24%)
DegQ <455..534 CDD:223343 19/83 (23%)
PDZ_signaling 606..668 CDD:238492 13/43 (30%)
PDZ 925..1011 CDD:214570
PDZ_signaling 1029..1110 CDD:238492
Nedd4NP_001344927.1 C2 <477..530 CDD:326325
WW 574..602 CDD:238122 6/40 (15%)
WW 727..756 CDD:306827 13/28 (46%)
WW 781..813 CDD:197736 12/31 (39%)
HECTc 874..1203 CDD:214523 52/237 (22%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5021
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

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