DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Magi and hecd-1

DIOPT Version :9

Sequence 1:NP_001286661.1 Gene:Magi / 37403 FlyBaseID:FBgn0034590 Length:1202 Species:Drosophila melanogaster
Sequence 2:NP_001368365.1 Gene:hecd-1 / 177486 WormBaseID:WBGene00016405 Length:2650 Species:Caenorhabditis elegans


Alignment Length:938 Identity:174/938 - (18%)
Similarity:290/938 - (30%) Gaps:356/938 - (37%)


- Green bases have known domain annotations that are detailed below.


  Fly    96 NSNLNSSLA--------------NGSSRKFNCSRDNV----------DDGGDAGEMAAASQTLSS 136
            |:.|.|.|:              :..|.|.:.|:..|          .|||: |:....:....|
 Worm  1418 NNRLKSGLSLETVTSMLQRSRHRSRGSYKISESKSKVVRGKDWRWEDQDGGE-GKFGRITSPPES 1481

  Fly   137 AGTDVV---GNGSGH---GNGT-----VTGNGEKSGGLAPPGGHHLRPPPPPALKKS-------- 182
            ...||.   ||.:.:   .||.     ||..|.:..  .|....|:......|::::        
 Worm  1482 GWVDVTWDNGNANSYRFGANGNFDIERVTSTGHRYS--TPSLASHVPTSVMEAVRRNRAFYTPKT 1544

  Fly   183 -----ASAVIGNSASREDVASLSGTSSLNSQMSVHNQFISGLPSNGIGSNGVHGG---------- 232
                 :|:|.|.|:|..  :|....|:|:...||.|...:|.||:|..|.|..|.          
 Worm  1545 TGGPPSSSVFGTSSSAG--SSRGAASALSRFASVKNTTPAGTPSSGGSSGGAIGKKSMSTTNLVD 1607

  Fly   233 ----------AATGRGGPPNSI--LKGSKENLL-----------------QNTYYNGETGDS--- 265
                      |:||:.....|:  ...|.||||                 ::....||..||   
 Worm  1608 ERQKTSGPSVASTGQAASAESLQHQTPSLENLLARAMPHAFGRIAENQEPEDEPMGGEESDSAAS 1672

  Fly   266 -----SLGSECGVGDVQHQNHESHDD--PGDGLG-PLPPKWETAYTERGELYFIDHNTGTSHWLD 322
                 |..|:..:|....|..:...|  |.|..| |..|:              |....|.....
 Worm  1673 MRSAASSNSQMSMGSSSQQQQQQDSDMTPRDSAGTPSTPR--------------DDKNQTLSVSA 1723

  Fly   323 PRL--SKYQKKSLE---DCCEDELPYGWEKIEDSMYGMYFIDHVNRRTQYENPVLEAKRRAAEQS 382
            |.|  ::.::.|.|   |...||                        |..|:..:.|.....|..
 Worm  1724 PDLAAARQRQASAETDGDADADE------------------------TNSEDKTVGADDAMEEDD 1764

  Fly   383 QQQQQMQQQQ--------QQMQEQRSK-------------------TPTALSETMPTEAAEAHEQ 420
            ::::.|:.::        :...|.:.|                   |..:||:. .:.|.:|...
 Worm  1765 EEEETMEDEEDDDDDDDDESSNENQEKLVELLGGERGLFDKLKEVITGESLSDA-SSSAKDATTN 1828

  Fly   421 EEDESPMKLPYKFTRNPAELQGQRINTTLLKSSRGLGFTIVGSDGSAGG-------DVEEFLQIK 478
            |..:...|.|.|:.:..:..      |.:||......:.:...|.:|.|       |.:::....
 Worm  1829 EAQKKGGKKPKKWFKKMSSY------TDVLKGLMQNRYPVALLDPAAAGIEMDEMMDDDDYYDFS 1887

  Fly   479 TVVPNGPAWLDGQLQTGDVLVYVNDTCVLGYTHHDMVNI-----------FQSILPG---ERAAL 529
               .:||.  ||.....:|..:      ||.......::           |..::.|   ||||:
 Worm  1888 ---EDGPD--DGDSVEDEVAAH------LGMPVDSFASMVAARTPITWRQFSELMSGSNRERAAM 1941

  Fly   530 ----EVCRGYP--------------LP-FDPNDPNTEVVTTMAVD--------GRESDKQRRLNM 567
                ...||.|              :| |||....:.|..|:.|:        |.......:::.
 Worm  1942 ARAVASSRGSPWEDDATVKCTFEALIPAFDPRPGRSNVNQTLEVELPTVVKDFGSTKASSSKIDK 2006

  Fly   568 DGNYNFLDLSGEGAKKTSGSGSGFILMKKPEIYTFSIMKGSMGFGFTIADSACGQIVKKILDRNC 632
            |....|. |.|   ...||..:..|.|.......|..|                ||:.       
 Worm  2007 DDQMRFF-LRG---PNMSGVDNVTIEMNDDSASLFRYM----------------QIIN------- 2044

  Fly   633 CTQLMEGDVLLEINGLNVRNK---------PHFYVVELLKECSQTTPTAVKIQRTPPDPPANNTL 688
                         |.:|...|         |.:.:.    .|| ...|.|::.:.|.:  .::|.
 Worm  2045 -------------NSVNWATKSDRSRRIWEPTYSIC----YCS-ADQTNVEVSKIPDE--ESSTP 2089

  Fly   689 AQLNQ----VGNVAKLRKNFVGSGLFRSKTPT---ADLYSTQVKEVLP----------------M 730
            .|:||    :|.::::::....:.:    ||.   :|..:.:|.:||.                :
 Worm  2090 CQVNQCLETIGLLSRIQQAMPEAEI----TPNVFISDKLTLKVTQVLSDALVVAARSLPEWCSRL 2150

  Fly   731 RPKTP---LVDTR------------RSRVQIQSPNNEVDDEGDGAAAAERKPLQLQTQGKSNSSL 780
            ..|.|   .|:||            |:.|.:|...:...:...|:|.|          |.|:::.
 Worm  2151 VYKYPCLFTVETRNMYMQATAFGVSRTIVWLQQRRDAAVERARGSAQA----------GNSSAAR 2205

  Fly   781 QELDDIPYMDPYP--KISRLSERLAEVT 806
            |.       |.|.  ::.||.....:||
 Worm  2206 QH-------DRYHEYRVGRLRHERVKVT 2226

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
MagiNP_001286661.1 WW 294..323 CDD:278809 3/28 (11%)
WW 342..372 CDD:238122 2/29 (7%)
PDZ 443..534 CDD:214570 20/115 (17%)
DegQ <455..534 CDD:223343 17/103 (17%)
PDZ_signaling 606..668 CDD:238492 8/70 (11%)
PDZ 925..1011 CDD:214570
PDZ_signaling 1029..1110 CDD:238492
hecd-1NP_001368365.1 Ank_2 345..436 CDD:403870
ANK repeat 345..372 CDD:293786
ANK repeat 374..403 CDD:293786
PTZ00322 383..>497 CDD:140343
ANK repeat 405..436 CDD:293786
F5_F8_type_C 1243..1365 CDD:419973
MIB_HERC2 1452..1509 CDD:399589 12/57 (21%)
HECTc 2221..2648 CDD:238033 2/6 (33%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5021
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

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