DRSC/TRiP Functional Genomics Resources

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Protein Alignment Magi and etc-1

DIOPT Version :9

Sequence 1:NP_001286661.1 Gene:Magi / 37403 FlyBaseID:FBgn0034590 Length:1202 Species:Drosophila melanogaster
Sequence 2:NP_495842.1 Gene:etc-1 / 174388 WormBaseID:WBGene00008429 Length:1001 Species:Caenorhabditis elegans


Alignment Length:328 Identity:64/328 - (19%)
Similarity:93/328 - (28%) Gaps:150/328 - (45%)


- Green bases have known domain annotations that are detailed below.


  Fly   305 RGELYFIDHNTGTSHWLDPRLSKYQKKSLEDCCEDELPYGWEKIEDSMYGM------------YF 357
            ||:||            ...|.:...|:..|         |:.:.:|::.:            ||
 Worm   473 RGDLY------------SGNLKEKMYKAETD---------WKDVTESVFSILGAIYQKDIRLKYF 516

  Fly   358 IDHVNRRTQYENPVLEA---KRRAAEQSQQQQQMQQQQQQMQEQRSKTPTALSETMPTEAAE--- 416
            .:..  .|.:...||..   .||...:.....::|                :..||.||..|   
 Worm   517 PEEF--WTNHGREVLSGIGEHRRMPRRRMPNGRLQ----------------IERTMDTEFVERLA 563

  Fly   417 --------AHEQEEDES-----------------PMKLPYK-----FTR---------------- 435
                    :...:|||.                 |..:|:.     |||                
 Worm   564 AIYEMDSDSENDDEDEDNNLPAVLRRAICVMKHIPFIVPFMDRVKLFTRLLNQDKEKHYTSTFGM 628

  Fly   436 ---NPA------------------ELQGQRIN----TTLLKSSRGLGFTIVGSDGSAGGDVEEFL 475
               .|:                  ::||.::|    ...:|.....|....|.||  ||...|||
 Worm   629 GFNGPSVTVRRDQVYMDAFETFAPKMQGDKVNDLKSMVRVKMVNWAGMNESGIDG--GGIFREFL 691

  Fly   476 Q--IKTV--VPNGPAWLDGQLQTGDVLVYVNDTC--VLGYTHHDMVNIFQSI------LPGERAA 528
            .  :||.  |..|....     |...|:|.|.|.  :||.   |.:..||.|      |..||..
 Worm   692 SELLKTAFNVERGFFTF-----TESKLLYPNPTAPFLLGV---DCLAHFQFIGRMIGKLIYERQL 748

  Fly   529 LEV 531
            .||
 Worm   749 QEV 751

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
MagiNP_001286661.1 WW 294..323 CDD:278809 4/17 (24%)
WW 342..372 CDD:238122 5/41 (12%)
PDZ 443..534 CDD:214570 31/105 (30%)
DegQ <455..534 CDD:223343 29/89 (33%)
PDZ_signaling 606..668 CDD:238492
PDZ 925..1011 CDD:214570
PDZ_signaling 1029..1110 CDD:238492
etc-1NP_495842.1 HECTc 661..998 CDD:214523 30/101 (30%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5021
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

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