DRSC/TRiP Functional Genomics Resources

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Protein Alignment Magi and herc-1

DIOPT Version :9

Sequence 1:NP_001286661.1 Gene:Magi / 37403 FlyBaseID:FBgn0034590 Length:1202 Species:Drosophila melanogaster
Sequence 2:NP_490834.1 Gene:herc-1 / 171700 WormBaseID:WBGene00021685 Length:1019 Species:Caenorhabditis elegans


Alignment Length:416 Identity:80/416 - (19%)
Similarity:137/416 - (32%) Gaps:147/416 - (35%)


- Green bases have known domain annotations that are detailed below.


  Fly   642 LLEINGLNVRNKPH-------FYVVELLKECSQTTPTAVK----IQRTPPDPPANNTLAQLNQ-- 693
            :|.:..|::.||.:       ||:.||      .|...:|    ::.|..||  |.|  :|:.  
 Worm   567 ILIMQKLSLINKTYHIIPLETFYIDEL------NTSVDLKLEYVLELTRQDP--NKT--ELDYWT 621

  Fly   694 -----VGNVAKLRKNFVGSGLFRSKTPTADLYSTQVKEVLPMRPKTPLVDTRRSRVQIQSPNNEV 753
                 :..|||....||.:.|.::....:.|::|....::...|...|. .||..:...:.|   
 Worm   622 HFPFLLNGVAKGELIFVEAWLMQTLRRQSSLFNTAHGTIIFELPHLELT-VRREFIVSDTMN--- 682

  Fly   754 DDEGDGAAAAERKPLQLQTQGKSNSSLQELDDIPYMDPYPKISRLSERLAEVTLQGDANGGIYGM 818
                             |..|.|.|.||:        |. |::...|       ..|..||:   
 Worm   683 -----------------QMAGLSESDLQK--------PL-KVNIAGE-------DADDAGGV--- 711

  Fly   819 PPSMQPLPLPLAHHESCYCYDCQAQRYRPGYFVQAQQAAMSGTTGQYSPLQTAHL---------- 873
                                       |..:|:...:..:....|.:|..:.:||          
 Worm   712 ---------------------------RKEFFILVMRKILQSDYGMFSEDEESHLVWFSGLPSEF 749

  Fly   874 ----QNERIQRRVNELLSDRRRVGFA--------NLDPPQQMQH----SPSWRNGALLDVSEDAD 922
                |..::.|.|...:.:...|.|.        .||.|..::.    |||...|..:.:|.:.|
 Worm   750 CDREQFHQLGRLVGLSIYNHSIVPFPFPLALYKYLLDTPPDLEDLCELSPSEGKGLKMLLSYEED 814

  Fly   923 QCELTEVTLERQALGF--GFRIVGGTEEGSQVTVGHIVPGGAADQDQRINTGDEILSIDGINVLN 985
            ..|      :...|.|  .|.|:|.|.....::.|...|...|::|:.:.     |.:       
 Worm   815 DVE------DVFGLNFCISFNILGETHTTELLSGGTEKPVTNANRDEYVR-----LYV------- 861

  Fly   986 SSHHKV-VSLVGESALRGQVTMILRR 1010
              ||:: :...||.|   |..::.|:
 Worm   862 --HHRLELGYNGEIA---QQALLFRK 882

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
MagiNP_001286661.1 WW 294..323 CDD:278809
WW 342..372 CDD:238122
PDZ 443..534 CDD:214570
DegQ <455..534 CDD:223343
PDZ_signaling 606..668 CDD:238492 8/32 (25%)
PDZ 925..1011 CDD:214570 19/89 (21%)
PDZ_signaling 1029..1110 CDD:238492
herc-1NP_490834.1 ATS1 2..359 CDD:227511
HECTc 667..1016 CDD:238033 55/306 (18%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5021
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

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