DRSC/TRiP Functional Genomics Resources

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Protein Alignment Tmtc3 and CYC8

DIOPT Version :10

Sequence 1:NP_477246.2 Gene:Tmtc3 / 37401 FlyBaseID:FBgn0020312 Length:926 Species:Drosophila melanogaster
Sequence 2:NP_009670.3 Gene:CYC8 / 852410 SGDID:S000000316 Length:966 Species:Saccharomyces cerevisiae


Alignment Length:424 Identity:84/424 - (19%)
Similarity:159/424 - (37%) Gaps:85/424 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly   460 EQLQRRGSLSWQRFSQAALAILLLTHALKTHQRNLD---------WRTEYSL------------- 502
            :|.|::.....|:..|||:.           |:.||         |.:..||             
Yeast    15 QQQQQQQQQQQQQQQQAAVP-----------QQPLDPLTQSTAETWLSIASLAETLGDGDRAAMA 68

  Fly   503 FMSGVHVNQRNAKLYNNVGHALENEGKFEEALLYFQQAVRIQTDDIGAHINVGRTFNNLKRYAEA 567
            :.:.:..|..:||...::.|...:...|:.|...:::|:.:..:.......:|..:..|.....|
Yeast    69 YDATLQFNPSSAKALTSLAHLYRSRDMFQRAAELYERALLVNPELSDVWATLGHCYLMLDDLQRA 133

  Fly   568 EQAYVQAKALFPQAKPGVS--YHARIAPNHLNVFINLANLIAKNQTRLEEADHLYRQAISMRSDY 630
            ..||.|  ||:..:.|.|.  :|.             ..::......|:.|:..:.:.:.:...:
Yeast   134 YNAYQQ--ALYHLSNPNVPKLWHG-------------IGILYDRYGSLDYAEEAFAKVLELDPHF 183

  Fly   631 VQA---YINRGDILMKLNRTAQAQEVYEQALLYDN---ENADIYYNLGVVFLEQGKSQQAQVYFN 689
            .:|   |...|.|.....:.:||.|.:...|....   :..||::.||.|....|:.|.|:..:.
Yeast   184 EKANEIYFRLGIIYKHQGKWSQALECFRYILPQPPAPLQEWDIWFQLGSVLESMGEWQGAKEAYE 248

  Fly   690 KAIELYPEHEQALLNSAILLQELG---GEEARRVSRSRLY----------KVLENDDQNEKVYFN 741
            ..:.....|       |.:||:||   |     :|..:.|          |.||.|..:...:::
Yeast   249 HVLAQNQHH-------AKVLQQLGCLYG-----MSNVQFYDPQKALDYLLKSLEADPSDATTWYH 301

  Fly   742 LGMLAMDESSFDEAEQFFKRAIHLKADFRSALF--NLALLLADTKRPLDAVPFLNQLIRHHPSHV 804
            ||.:.|..:.:..|...|::|::  .|.|:.:|  ::.:|.....:..||:....:.||.:|...
Yeast   302 LGRVHMIRTDYTAAYDAFQQAVN--RDSRNPIFWCSIGVLYYQISQYRDALDAYTRAIRLNPYIS 364

  Fly   805 KGLILLGDIYINHMKDLDEAEKCYRSILHYDPHN 838
            :....||.:|......|.:|...|:.....|.:|
Yeast   365 EVWYDLGTLYETCNNQLSDALDAYKQAARLDVNN 398

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Tmtc3NP_477246.2 TMTC_DUF1736 323..396 CDD:462468
TPR 507..762 CDD:440225 54/275 (20%)
TPR repeat 514..542 CDD:276809 6/27 (22%)
TPR repeat 547..591 CDD:276809 11/45 (24%)
TPR repeat 598..625 CDD:276809 2/26 (8%)
TPR repeat 630..660 CDD:276809 8/32 (25%)
LapB 634..896 CDD:442196 51/223 (23%)
TPR repeat 665..693 CDD:276809 8/27 (30%)
TPR repeat 737..764 CDD:276809 6/26 (23%)
TPR repeat 803..834 CDD:276809 6/30 (20%)
TPR repeat 839..867 CDD:276809 84/424 (20%)
CYC8NP_009670.3 LapB 46..326 CDD:442196 58/308 (19%)
TPR repeat 46..74 CDD:276809 3/27 (11%)
TPR repeat 80..108 CDD:276809 6/27 (22%)
TPR repeat 113..143 CDD:276809 8/31 (26%)
TPR repeat 150..178 CDD:276809 3/40 (8%)
TPR repeat 184..211 CDD:276809 7/26 (27%)
TPR repeat 223..253 CDD:276809 8/29 (28%)
TPR 251..>414 CDD:440225 36/162 (22%)
TPR repeat 258..290 CDD:276809 9/36 (25%)
TPR repeat 296..324 CDD:276809 6/27 (22%)
TPR repeat 329..359 CDD:276809 5/29 (17%)
TPR repeat 364..393 CDD:276809 6/28 (21%)
MSCRAMM_ClfA 695..>910 CDD:468110
Blue background indicates that the domain is not in the aligned region.

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