DRSC/TRiP Functional Genomics Resources

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Protein Alignment Tmtc3 and TTL1

DIOPT Version :10

Sequence 1:NP_477246.2 Gene:Tmtc3 / 37401 FlyBaseID:FBgn0020312 Length:926 Species:Drosophila melanogaster
Sequence 2:NP_175737.1 Gene:TTL1 / 841764 AraportID:AT1G53300 Length:699 Species:Arabidopsis thaliana


Alignment Length:391 Identity:78/391 - (19%)
Similarity:136/391 - (34%) Gaps:122/391 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly   485 HALK--THQRNLDWRT-------------EYS--LFMSGVHVNQRNAKLYNNVGHALE------- 525
            |.:|  ..:|..||:|             ::|  |||..|....:..:|.:.....||       
plant   339 HLIKCVDARRVTDWKTVLIEADAAIVSGADFSPQLFMCKVEAFLKLHRLDDAQSKLLEVPKVEPF 403

  Fly   526 ----NEGKFE----EALLYFQQAVRIQTDDIGAHINVGRTFNNLKRYAEAEQAYVQAKALFPQAK 582
                ::.:|.    ||.:||          :.|.|.:.     |.|:..|..|..:|..:.|:. 
plant   404 PVSCSQTRFSGMACEAYIYF----------VKAQIEMA-----LGRFENAVMAAEKASQIDPRC- 452

  Fly   583 PGVSYHARIAPNHLNVFINLANLIAKNQTRLEEADHLYRQAISMRSDYVQAYINRGDILMKLNRT 647
                       |.:.:..|...|:|:.:.                         ||:.|.|..|.
plant   453 -----------NEVAMLHNTVTLVARARA-------------------------RGNDLYKSERY 481

  Fly   648 AQAQEVYEQALLYDNENADIYYNLGVVFLEQGKSQQAQVYFNKAIELYPEHEQALLNSAILLQEL 712
            .:|...|.:.|..|..||.:|.|....:.:.|..:::....|:|:...|.:.:.||..|....::
plant   482 TEASSAYAEGLRLDPCNAILYCNRAACWFKLGMWERSIEDCNQALRYQPSYTKPLLRRAASNSKM 546

  Fly   713 GGEEARRVSRSRLYKVLENDDQNEKVYFNLGMLAMDESSFD---------EAEQFFKRAIHLKAD 768
            ....|.......|.:.|.:|.:..:..|: ..:|:.:|..:         |.|:     |:....
plant   547 ERWGAAVSDYEALIRELPHDKEVAESLFH-AQVALKKSRGEEVLNMEFGGEVEE-----IYSLEQ 605

  Fly   769 FRSALFNLA------LLLADTKRPLDAVPFLNQLIRHHPSHVKGLILLGDIYINHMK-DLDEAEK 826
            |:||: ||.      ...|...:.....||::.|...:||            |:.:| |:|   |
plant   606 FKSAM-NLPGVSVIHFSTASDHQCKQISPFVDSLCTRYPS------------IHFLKVDID---K 654

  Fly   827 C 827
            |
plant   655 C 655

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Tmtc3NP_477246.2 TMTC_DUF1736 323..396 CDD:462468
TPR 507..762 CDD:440225 50/278 (18%)
TPR repeat 514..542 CDD:276809 8/42 (19%)
TPR repeat 547..591 CDD:276809 8/43 (19%)
TPR repeat 598..625 CDD:276809 3/26 (12%)
TPR repeat 630..660 CDD:276809 8/29 (28%)
LapB 634..896 CDD:442196 47/210 (22%)
TPR repeat 665..693 CDD:276809 6/27 (22%)
TPR repeat 737..764 CDD:276809 5/35 (14%)
TPR repeat 803..834 CDD:276809 6/26 (23%)
TPR repeat 839..867 CDD:276809
TTL1NP_175737.1 LapB 238..562 CDD:442196 53/274 (19%)
TPR repeat 260..290 CDD:276809
TPR repeat 295..318 CDD:276809
TPR 418..>582 CDD:440225 42/216 (19%)
TPR repeat 419..447 CDD:276809 10/42 (24%)
TPR repeat 469..493 CDD:276809 7/48 (15%)
TPR repeat 498..528 CDD:276809 7/29 (24%)
TPR repeat 533..561 CDD:276809 5/27 (19%)
TRX_family 604..691 CDD:239245 17/68 (25%)
Blue background indicates that the domain is not in the aligned region.

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