DRSC/TRiP Functional Genomics Resources

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Protein Alignment Tmtc3 and AT1G05150

DIOPT Version :10

Sequence 1:NP_477246.2 Gene:Tmtc3 / 37401 FlyBaseID:FBgn0020312 Length:926 Species:Drosophila melanogaster
Sequence 2:NP_172007.1 Gene:AT1G05150 / 839312 AraportID:AT1G05150 Length:808 Species:Arabidopsis thaliana


Alignment Length:283 Identity:60/283 - (21%)
Similarity:120/283 - (42%) Gaps:55/283 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly   491 QRNLDWRT---EYSLFMSGVHVNQRNA-------KLYNN---VGHALENEGKFEEALLYFQQAVR 542
            ::.:.|..   :|.:|:..:.|.:..|       :.::.   :|..|.....|:|||:.|::|..
plant   198 EKRIYWEESSHDYGVFVKELGVLRSKADGARSREEAFDGHMAIGRVLYEHQLFKEALVSFKRACE 262

  Fly   543 IQTDDIGAHINVGRTFNNLKRYAEAEQAYVQAKALFPQAKPGVSYHARIAPNHLNVFINLANLIA 607
            :|..|:..|...|.....|.:..|::..::.|   ...|:.|.:..|.:.|   .:::|| .:..
plant   263 LQPTDVRPHFKAGNCLYVLGKCKESKDEFLLA---LEAAESGGNQWAYLLP---QIYVNL-GIAL 320

  Fly   608 KNQTRLEEADHLYR----------------------------------QAISMRSDYVQAYINRG 638
            :.:..:..|...||                                  :||.::.||..|:.:..
plant   321 EGEGMVLSACEYYREAAILCPTHFRALKLLGSALFGVGEYRAAVKALEEAIYLKPDYADAHCDLA 385

  Fly   639 DILMKLNRTAQAQEVYEQALLYDNENADIYYNLGVVFLEQGKSQQAQVYFNKAIELYPEHEQALL 703
            ..|..:....:|.||:::|:.....:.|..||||.::::.|:.|:|...:.:.:.::|.|.:|.|
plant   386 SSLHSMGEDERAIEVFQRAIDLKPGHVDALYNLGGLYMDLGRFQRASEMYTRVLTVWPNHWRAQL 450

  Fly   704 NSAILLQELG-GEEARRVSRSRL 725
            |.|:.|...| .|||:|..:..|
plant   451 NKAVSLLGAGETEEAKRALKEAL 473

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Tmtc3NP_477246.2 TMTC_DUF1736 323..396 CDD:462468
TPR 507..762 CDD:440225 57/264 (22%)
TPR repeat 514..542 CDD:276809 9/37 (24%)
TPR repeat 547..591 CDD:276809 9/43 (21%)
TPR repeat 598..625 CDD:276809 6/60 (10%)
TPR repeat 630..660 CDD:276809 7/29 (24%)
LapB 634..896 CDD:442196 26/93 (28%)
TPR repeat 665..693 CDD:276809 8/27 (30%)
TPR repeat 737..764 CDD:276809
TPR repeat 803..834 CDD:276809
TPR repeat 839..867 CDD:276809
AT1G05150NP_172007.1 EF-hand_7 9..81 CDD:463900
TPR repeat 237..262 CDD:276809 8/24 (33%)
PilF 243..345 CDD:442297 23/108 (21%)
TPR repeat 267..297 CDD:276809 6/32 (19%)
TPR 309..>485 CDD:440225 37/169 (22%)
TPR repeat 310..338 CDD:276809 6/31 (19%)
TPR repeat 345..372 CDD:276809 1/26 (4%)
TPR repeat 377..407 CDD:276809 7/29 (24%)
TPR repeat 412..439 CDD:276809 8/26 (31%)
TPR repeat 446..474 CDD:276809 11/28 (39%)
ZZ 737..>768 CDD:412288
Blue background indicates that the domain is not in the aligned region.

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