DRSC/TRiP Functional Genomics Resources

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Protein Alignment Tmtc3 and AT5G63200

DIOPT Version :10

Sequence 1:NP_477246.2 Gene:Tmtc3 / 37401 FlyBaseID:FBgn0020312 Length:926 Species:Drosophila melanogaster
Sequence 2:NP_201125.2 Gene:AT5G63200 / 836441 AraportID:AT5G63200 Length:649 Species:Arabidopsis thaliana


Alignment Length:277 Identity:59/277 - (21%)
Similarity:108/277 - (38%) Gaps:44/277 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly   663 ENADIYYNLGVVFLEQGKSQQAQVYFNKAIELY---------PE--------HEQALL----NSA 706
            :||..::.||::|...|:||:|...:.||.|:.         ||        |.|.||    ...
plant   138 KNAHAHFILGLMFQRLGQSQKAIPEYEKAEEILLGCEPEIARPELLLLVQIHHGQCLLLDGFGDT 202

  Fly   707 ILLQELGGEEARRVSRSRLYKVLENDDQNEKVYFNLGMLAMDESSFDEAEQFFKRAIHLKADFRS 771
            ..::||.|||...: .|:|...::.|.:...|:..||::.:.......|.......:.|..|...
plant   203 DSVKELEGEELEEI-LSKLKDSIKLDVRQAAVWNTLGLMLLKAGCLMSAISVLSSLLALVPDNYD 266

  Fly   772 ALFNLA------------------LLLADTKRPLDAVPFLNQLIRHHPSHVKGLILLG--DIYIN 816
            .|.||.                  |:|.|...|...:.:..:|:..|.|.|.|....|  |...:
plant   267 CLANLGVAYLQSGDMELSAKCFQDLVLKDHNHPAALINYAAELLCKHSSTVAGAGANGGADASED 331

  Fly   817 HMKDLDEAEKCYRSILHYDPHNTQGLHNLCVVFVERKRLAKAAACLQYAQRLAPAEDYIGRHLQI 881
            ....::.|::|..:.|..||.:.....||...:........::.||:.|.:|.|  :.:.....:
plant   332 QKAPMNVAKECLLAALRSDPKSAHAWVNLANSYYMMGDHRSSSKCLEKAAKLDP--NCMATRFAV 394

  Fly   882 VLARLQKINKLPESAPE 898
            .:.|::...:..:::.:
plant   395 AVQRIKDAERSQDASDQ 411

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Tmtc3NP_477246.2 TMTC_DUF1736 323..396 CDD:462468
TPR 507..762 CDD:440225 30/119 (25%)
TPR repeat 514..542 CDD:276809
TPR repeat 547..591 CDD:276809
TPR repeat 598..625 CDD:276809
TPR repeat 630..660 CDD:276809
LapB 634..896 CDD:442196 59/273 (22%)
TPR repeat 665..693 CDD:276809 10/27 (37%)
TPR repeat 737..764 CDD:276809 4/26 (15%)
TPR repeat 803..834 CDD:276809 7/32 (22%)
TPR repeat 839..867 CDD:276809 5/27 (19%)
AT5G63200NP_201125.2 PEP_TPR_lipo <137..615 CDD:274350 59/277 (21%)
TPR repeat 231..259 CDD:276809 4/27 (15%)
TPR repeat 265..293 CDD:276809 4/27 (15%)
TPR repeat 298..349 CDD:276809 11/50 (22%)
TPR repeat 354..382 CDD:276809 5/27 (19%)
Spy 402..>628 CDD:443119 0/10 (0%)
TPR repeat 483..511 CDD:276809
TPR repeat 517..545 CDD:276809
TPR repeat 550..582 CDD:276809
TPR repeat 587..615 CDD:276809
Blue background indicates that the domain is not in the aligned region.

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