DRSC/TRiP Functional Genomics Resources

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Protein Alignment Tmtc3 and TTL4

DIOPT Version :10

Sequence 1:NP_477246.2 Gene:Tmtc3 / 37401 FlyBaseID:FBgn0020312 Length:926 Species:Drosophila melanogaster
Sequence 2:NP_191421.2 Gene:TTL4 / 825031 AraportID:AT3G58620 Length:682 Species:Arabidopsis thaliana


Alignment Length:496 Identity:96/496 - (19%)
Similarity:164/496 - (33%) Gaps:141/496 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly   426 LPASNLFFPVGFV----VAERILYMPSMGYCLLVA-YGFEQLQRRGSLSWQRFSQAALAILLLTH 485
            ||..|: .|.|.:    :|.|....|.. .|...| ||...:.|.|.    :.|.|..|...::.
plant   152 LPTGNI-CPSGRILKTGMATRASVRPET-LCTGTANYGHGNIIRTGG----KVSHATKAAAEMSD 210

  Fly   486 ALKTHQ------RNLDWRTEYSLFMSGVHVNQRNAKLYNNVGHALENEGKFEEALLYFQQAVRIQ 544
            :.:..:      |..::....:|:...:.::..|....:|...||...|:.|||:....:|||..
plant   211 SEEVKKAGNVMYRKGNYAEALALYDRAISLSPENPAYRSNRAAALAASGRLEEAVKECLEAVRCD 275

  Fly   545 TDDIGAHINVGRTF------NNLKRY--------------------------------------- 564
            .....||..:...:      .|.:|:                                       
plant   276 PSYARAHQRLASLYLRLGEAENARRHLCVSGQCPDQADLQRLQTLEKHLRLCTEARKIGDWRTVI 340

  Fly   565 ----------AEAEQAYVQAKA-------------LFPQAKPGVSYHARIAPNHL-NVFINLANL 605
                      |::....|..||             |...:.|.:.:|....|..| .:..:...|
plant   341 SEIDAAIANGADSSPQLVACKAEAFLRLHQIKDSDLCISSIPRLDHHHTQPPEKLFGIVCDAYVL 405

  Fly   606 IAKNQT-----RLEEADHLYRQAISM---RSDYVQAYIN----------RGDILMKLNRTAQAQE 652
            ..:.|.     |.|.|.....:|:::   .|..|.:.:|          ||:.|....|.::|..
plant   406 CVQAQVDMALGRFENAIVKVERAMTIDHSNSPEVVSVLNNVKNVAKARTRGNELFSSGRYSEASV 470

  Fly   653 VYEQALLYDNENADIYYNLGVVFLEQGKSQQAQVYFNKAIELYPEHEQALLNSA----------- 706
            .|...|..|..|:.:|.|....:.:.|..:::....|:|:.:.|.:.:|||..|           
plant   471 AYGDGLKLDAFNSVLYCNRAACWFKLGMWEKSVDDCNQALRIQPSYTKALLRRAASYGKLGRWED 535

  Fly   707 ------ILLQELGGEEARRVSRSRLYKVLENDDQNEKVYFNLGMLAMDESSFDEAEQFFKRAIHL 765
                  :|.:||.|:.....|..|....|.|..:..| |........:.|:.|:    ||.|..|
plant   536 AVRDYEVLRKELPGDSEVAESLQRARNALSNKSEEPK-YLGFNNEVEEVSTLDK----FKTATSL 595

  Fly   766 KA----DFRSALFNLALLLADTKRPLDAV-PFLNQLIRHHP 801
            ..    .|:|:          :.|..:|: ||:|.|...:|
plant   596 PGISVFHFKSS----------SNRQSEAISPFVNTLCLRYP 626

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Tmtc3NP_477246.2 TMTC_DUF1736 323..396 CDD:462468
TPR 507..762 CDD:440225 66/358 (18%)
TPR repeat 514..542 CDD:276809 8/27 (30%)
TPR repeat 547..591 CDD:276809 11/111 (10%)
TPR repeat 598..625 CDD:276809 6/31 (19%)
TPR repeat 630..660 CDD:276809 9/39 (23%)
LapB 634..896 CDD:442196 45/200 (23%)
TPR repeat 665..693 CDD:276809 5/27 (19%)
TPR repeat 737..764 CDD:276809 7/26 (27%)
TPR repeat 803..834 CDD:276809
TPR repeat 839..867 CDD:276809
TTL4NP_191421.2 TadD <204..302 CDD:444034 18/97 (19%)
TPR repeat 215..239 CDD:276809 2/23 (9%)
TPR repeat 244..274 CDD:276809 10/29 (34%)
TPR repeat 279..302 CDD:276809 4/22 (18%)
TPR 401..>574 CDD:440225 37/173 (21%)
TPR repeat 402..430 CDD:276809 6/27 (22%)
TPR repeat 482..512 CDD:276809 6/29 (21%)
TPR repeat 517..541 CDD:276809 4/23 (17%)
TRX_family 589..674 CDD:239245 13/48 (27%)
Blue background indicates that the domain is not in the aligned region.

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