DRSC/TRiP Functional Genomics Resources

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Protein Alignment Tmtc3 and TTL3

DIOPT Version :10

Sequence 1:NP_477246.2 Gene:Tmtc3 / 37401 FlyBaseID:FBgn0020312 Length:926 Species:Drosophila melanogaster
Sequence 2:NP_565976.1 Gene:TTL3 / 818858 AraportID:AT2G42580 Length:691 Species:Arabidopsis thaliana


Alignment Length:448 Identity:83/448 - (18%)
Similarity:142/448 - (31%) Gaps:184/448 - (41%)


- Green bases have known domain annotations that are detailed below.


  Fly   510 NQRNAKLYNNVGHALENEGKFEEALLYFQQAVRIQTDDIGAHINVGRTFNNLKRYAEAEQAYVQA 574
            |..|.:....:|:.:...|.|.|||..:.:|:.|...:.....|.......|:|..||.:..::|
plant   216 NGENPEELKRMGNDMYRRGSFSEALSLYDRAILISPGNAAYRSNRAAALTALRRLGEAVKECLEA 280

  Fly   575 KALFPQAKPGVSY---HARIAPNHLNVFINLANLIAKNQTR--------LEEAD---------HL 619
            ..:.|      ||   |.|:|    ::::.|..  |:|..|        .::||         ||
plant   281 VRIDP------SYSRAHQRLA----SLYLRLGE--AENARRHICFSGQCPDQADLQRLQTLEKHL 333

  Fly   620 YR-----------------------------QAISMR------------SDY------------- 630
            .|                             |.::.:            ||:             
plant   334 RRCWEARKIGDWKTAIKETDAAIANGADSSPQLVACKAEAFLRLKQIEDSDFCVSCIPRLDHHYH 398

  Fly   631 -----------VQAYI------------------------------------------------N 636
                       |:||:                                                .
plant   399 SQPQVKLFGMVVEAYVLCIQAQVDMALGRFENAVVKAERAAMLDQTNPEVVSVLNNVKMVVRART 463

  Fly   637 RGDILMKLNRTAQAQEVYEQALLYDNENADIYYNLGVVFLEQGKSQQAQVYFNKAIELYPEHEQA 701
            ||:.|....|.::|...|...|..|:.|:.:|.|....:.:.|..:::....|.|::..|.:.:|
plant   464 RGNELFSSGRFSEACVAYGDGLKQDDSNSVLYCNRAACWYKLGLWEKSVEDCNHALKSQPSYIKA 528

  Fly   702 LLNSA-----------------ILLQELGGEEARRVSRSRLYKVLENDDQNEK-VYFNLGMLAMD 748
            ||..|                 .|.:||.|:.....|..|...||.|..|..| :.||..:.|: 
plant   529 LLRRAASYGKLGRWEDAVKDYEFLRRELPGDSEVAESLERAKTVLMNRSQESKSLGFNNEVEAV- 592

  Fly   749 ESSFDEAEQFFKRAIHLKA----DFRSALFNLALLLADTKRPLDAV-PFLNQLIRHHP 801
             |:.|:    ||:::.|..    .|:|:          :.|..:.: ||:|.|...:|
plant   593 -STLDK----FKKSVALPGVSVFHFKSS----------SNRQCEEISPFINTLCLRYP 635

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Tmtc3NP_477246.2 TMTC_DUF1736 323..396 CDD:462468
TPR 507..762 CDD:440225 74/402 (18%)
TPR repeat 514..542 CDD:276809 7/27 (26%)
TPR repeat 547..591 CDD:276809 10/46 (22%)
TPR repeat 598..625 CDD:276809 10/72 (14%)
TPR repeat 630..660 CDD:276809 10/101 (10%)
LapB 634..896 CDD:442196 47/239 (20%)
TPR repeat 665..693 CDD:276809 5/27 (19%)
TPR repeat 737..764 CDD:276809 8/27 (30%)
TPR repeat 803..834 CDD:276809
TPR repeat 839..867 CDD:276809
TTL3NP_565976.1 TPR 213..>382 CDD:440225 32/177 (18%)
TPR repeat 220..248 CDD:276809 7/27 (26%)
TPR repeat 253..283 CDD:276809 6/29 (21%)
TPR 411..>578 CDD:440225 30/166 (18%)
TPR repeat 412..440 CDD:276809 2/27 (7%)
TPR repeat 491..521 CDD:276809 6/29 (21%)
TPR repeat 526..550 CDD:276809 4/23 (17%)
TRX_family 598..687 CDD:239245 11/48 (23%)
Blue background indicates that the domain is not in the aligned region.

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