DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Tmtc3 and AT2G32450

DIOPT Version :10

Sequence 1:NP_477246.2 Gene:Tmtc3 / 37401 FlyBaseID:FBgn0020312 Length:926 Species:Drosophila melanogaster
Sequence 2:NP_180804.1 Gene:AT2G32450 / 817806 AraportID:AT2G32450 Length:802 Species:Arabidopsis thaliana


Alignment Length:305 Identity:69/305 - (22%)
Similarity:127/305 - (41%) Gaps:54/305 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly   520 VGHALENEGKFEEALLYFQQAVRIQTDDIGAHINVGRTFNNLKRYAEAEQAYVQAKALFPQAKPG 584
            :|..|.....|:|||:.|::|..:|..|:..|...|.....|.:|.|::..::.|   ...|:.|
plant   235 IGKVLYEHQLFKEALVSFKRACELQPTDVRPHFKAGNCLYVLGKYKESKDEFLLA---LEAAESG 296

  Fly   585 VSYHARIAPNHLNVFINLANLIAKNQTRLEEADHLYR---------------------------- 621
            .:..|.:.|   .:::|| .:..:.:..:..|...||                            
plant   297 GNQWAYLLP---QIYVNL-GISLEGEGMVLSACEYYREAAILCPTHYRALKLLGSALFGVGEYRA 357

  Fly   622 ------QAISMRSDYVQAYINRGDILMKLNRTAQAQEVYEQALLYDNENADIYYNLGVVFLEQGK 680
                  :||.::.||..|:.:....|..:....:|.||:::|:.....:.|..||||.::::.|:
plant   358 AVKALEEAIYLKPDYADAHCDLASSLHAMGEDERAIEVFQRAIDLKPGHVDALYNLGGLYMDLGR 422

  Fly   681 SQQAQVYFNKAIELYPEHEQALLNSAILLQELG-GEEARR--------VSRSRLYKVLENDDQ-N 735
            .|:|...:.:.:.::|.|.:|.||.|:.|...| .|||:|        .:|..|:..:.:..| .
plant   423 FQRASEMYTRVLAVWPNHWRAQLNKAVSLLGAGETEEAKRALKEALKMTNRVELHDAVSHLKQLQ 487

  Fly   736 EKVYFNLGMLAMDESSFDEAEQFFKRAIHLKADFRSALFNLALLL 780
            :|.....|..|.:|..|...|....:.:..|...|.   :||:.|
plant   488 KKKKVKKGNSANEEGPFIVVESSKFKTVGEKTTLRP---DLAIAL 529

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Tmtc3NP_477246.2 TMTC_DUF1736 323..396 CDD:462468
TPR 507..762 CDD:440225 64/285 (22%)
TPR repeat 514..542 CDD:276809 8/21 (38%)
TPR repeat 547..591 CDD:276809 10/43 (23%)
TPR repeat 598..625 CDD:276809 6/60 (10%)
TPR repeat 630..660 CDD:276809 7/29 (24%)
LapB 634..896 CDD:442196 39/157 (25%)
TPR repeat 665..693 CDD:276809 8/27 (30%)
TPR repeat 737..764 CDD:276809 6/26 (23%)
TPR repeat 803..834 CDD:276809
TPR repeat 839..867 CDD:276809
AT2G32450NP_180804.1 NrfG 230..375 CDD:443378 29/146 (20%)
TPR repeat 232..257 CDD:276809 8/21 (38%)
TPR repeat 262..292 CDD:276809 7/32 (22%)
TPR 304..>469 CDD:440225 36/168 (21%)
TPR repeat 305..333 CDD:276809 6/31 (19%)
TPR repeat 339..367 CDD:276809 1/27 (4%)
TPR repeat 372..402 CDD:276809 7/29 (24%)
TPR repeat 407..435 CDD:276809 8/27 (30%)
TPR repeat 441..469 CDD:276809 10/27 (37%)
ZZ 730..>763 CDD:412288
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.