DRSC/TRiP Functional Genomics Resources

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Protein Alignment Tmtc3 and ifit14

DIOPT Version :10

Sequence 1:NP_477246.2 Gene:Tmtc3 / 37401 FlyBaseID:FBgn0020312 Length:926 Species:Drosophila melanogaster
Sequence 2:NP_001287802.1 Gene:ifit14 / 794786 ZFINID:ZDB-GENE-131120-20 Length:433 Species:Danio rerio


Alignment Length:472 Identity:88/472 - (18%)
Similarity:163/472 - (34%) Gaps:166/472 - (35%)


- Green bases have known domain annotations that are detailed below.


  Fly   482 LLTHALKTHQRNLDWRT-EYSLFMSGV-----HVNQRN----AKLYNNVGHALENEGKFEEALLY 536
            ||...|:..:.:..|.. :|...:.|:     ||:.:.    ...||.:|...::.|...|||..
Zfish     4 LLKGELEKLECHFTWDLGQYQNELQGMKRKMDHVDPQKISSPVHYYNLLGFIQKSLGSDREALES 68

  Fly   537 FQQAVRIQTDDIGAHINVGRTFNNLKRYAEAEQAYVQAKALFPQAKPGVSYHARIAPNHLNVFIN 601
            .|:|                            ::.:|.:.....|              :.:.:|
Zfish    69 LQKA----------------------------ESVIQEQGTEETA--------------VRLLVN 91

  Fly   602 LANL---------IAKNQTRLEEADHLYRQAISMRSDYVQAYIN--RGDILMKLNRTAQAQEV-- 653
            .|||         :.|::..|||.:.|.|...:.....:...::  :|..|:|.|::.::|.:  
Zfish    92 KANLAWVYFYLGELEKSRGYLEELEELQRIHPAPPGCPLHPEVSGEKGWTLVKFNKSKKSQAIGY 156

  Fly   654 YEQALLYDNENADIYYNLGV------VFLEQGKSQQAQV--------------------YFNKAI 692
            ::.||..:.|..:.:..|.:      ::.:....|:|::                    |..|..
Zfish   157 FKMALEAEPERKEWHKGLAISMSKACLWYKCTPEQKAEILEKVKTAAEIDPNDLFLQSLYVLKKF 221

  Fly   693 ELYPEHE----QALLNSAILLQELGG-----------------EEARRV-----SRSRLYKVLEN 731
            |:..|:.    |:||..:|....|.|                 ||.:||     |.|.|.|:|.|
Zfish   222 EVQGENVDEEIQSLLKKSISTANLVGLNYIIEYFKGISYGRAIEEVQRVREIFPSSSTLLKILAN 286

  Fly   732 DDQNEKVYFNLGMLAMDESSFDEAEQFFKRAIHLKADFRSALFNLALLLADTKRPLDAVPFLNQL 796
                   .:...:.:|.|.| .|...:.:::|.|                           ..::
Zfish   287 -------LYKWKVFSMKEDS-RERRIWVQKSIEL---------------------------FEEV 316

  Fly   797 IRHHPSHVKGLILLGDIYINHMKDLDEAEKCYRSILHYD----PHNTQGLHNLCVVFVER----- 852
            :||:|..|||...|..:: .:..:.:.||:.|:.:|..|    ||:.|.|:.....:|..     
Zfish   317 VRHYPDCVKGRSDLASLH-RYAHNTERAEEIYQQLLSEDHTLPPHSQQLLYYSYACYVHHTGQSR 380

  Fly   853 ----KRLAKAAACLQYA 865
                ..|.|||....|:
Zfish   381 DKSINFLMKAAEIKNYS 397

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Tmtc3NP_477246.2 TMTC_DUF1736 323..396 CDD:462468
TPR 507..762 CDD:440225 58/328 (18%)
TPR repeat 514..542 CDD:276809 9/27 (33%)
TPR repeat 547..591 CDD:276809 2/43 (5%)
TPR repeat 598..625 CDD:276809 10/35 (29%)
TPR repeat 630..660 CDD:276809 7/33 (21%)
LapB 634..896 CDD:442196 59/301 (20%)
TPR repeat 665..693 CDD:276809 5/53 (9%)
TPR repeat 737..764 CDD:276809 4/26 (15%)
TPR repeat 803..834 CDD:276809 8/30 (27%)
TPR repeat 839..867 CDD:276809 8/36 (22%)
ifit14NP_001287802.1 BepA 48..209 CDD:443813 32/202 (16%)
TPR repeat 248..272 CDD:276809 4/23 (17%)
LapB <260..433 CDD:442196 38/174 (22%)
TPR repeat 277..319 CDD:276809 11/76 (14%)
TPR repeat 324..352 CDD:276809 7/28 (25%)
TPR repeat 358..392 CDD:276809 8/33 (24%)
Blue background indicates that the domain is not in the aligned region.

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