DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Tmtc3 and Odad4

DIOPT Version :9

Sequence 1:NP_477246.2 Gene:Tmtc3 / 37401 FlyBaseID:FBgn0020312 Length:926 Species:Drosophila melanogaster
Sequence 2:NP_083194.2 Gene:Odad4 / 74407 MGIID:1921657 Length:624 Species:Mus musculus


Alignment Length:481 Identity:91/481 - (18%)
Similarity:186/481 - (38%) Gaps:123/481 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly   461 QLQRRGSLSWQRFSQAALAIL---------------LLTHALK----------THQRNLDWRTEY 500
            :::|:|||..::..:..|..|               |:...:|          |....||.|:.:
Mouse   172 EIKRKGSLKSEKTVRQLLGELYVDKEYLEKLLLDEDLIKGTIKSGLTVEDLIMTGINYLDTRSNF 236

  Fly   501 SLFMSGVHVNQRNAKLYNNVGHALENEGKFEEALLYFQQAVRIQT--------DDIGAHINVGRT 557
            ......::..:|:.||             .:|..|..::....||        :||...:..|..
Mouse   237 WRQQKPIYARERDRKL-------------MQEKWLRDRKRSPSQTAHYILKSLEDIDMLLTSGSA 288

  Fly   558 FNNLKRYAEAEQAYVQAKALFPQAKPGVSYHARIAPNHLNVFINLANLIAKNQTRLEE---ADHL 619
            ..:|::   ||:.          .|..:.::....||...:..||.:.|...|..|.:   |...
Mouse   289 DGSLQK---AEKV----------LKKVLEWNQEEVPNKDELVGNLYSCIGNAQIELGQMVAALQS 340

  Fly   620 YRQAISMRSDY------VQAYINRGDILMKLNRTAQAQEVYEQALLYDN---ENADIYYNLGVVF 675
            :|:.:.:..::      .:|..|.|.:..::.:..||.:.:|:.:....   |...:::.:|..:
Mouse   341 HRKDLEIAKEHDLPDAKSRALDNIGRVFARVGKFQQAIDTWEEKIPLAKTTLEKTWLFHEIGRCY 405

  Fly   676 LEQGKSQQAQVYFNKAIELYPEHEQAL---LNSAILLQEL-----GGEEA-----RRVSRSRLYK 727
            ||..::.|||.|..|: :.|.|.|..|   ||:::|:.:.     ..|.|     :.:.|:   |
Mouse   406 LELDQAWQAQSYGEKS-QQYAEEEGDLEWQLNASVLVAQAQVKLRDFESAVNNFEKALERA---K 466

  Fly   728 VLENDDQNEKVYFNLGMLAMDESSFDEAEQF----FKRAIHLKADFRSALFNLALLLADTKRPL- 787
            ::.|::..:.:     :.|:|:::....|:.    ::..:..||:.:..:..:.|..|..|.|| 
Mouse   467 LVHNNEAQQAI-----ISALDDANKGIIEELKKTNYREILREKAERQDIMSQMDLQGASEKEPLR 526

  Fly   788 ---DAVPFLNQLIRHHPSHVK------------GLI--LLGDIYINHMKDLDEAEKCYRSILHYD 835
               :....:.|..|...|..:            ||.  ||||.:.:::....|:.:.||.:..|.
Mouse   527 GREEQERVVKQWERDQESEREATDDEQDRKSSGGLSKKLLGDGHSSNLGIRRESREIYRRLSDYS 591

  Fly   836 PH--NTQGLHNLCVVFVERKRLAKAA 859
            .|  :..|...      :.|:.|:||
Mouse   592 SHLPSEDGSQK------QEKKQAEAA 611

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Tmtc3NP_477246.2 DUF1736 323..396 CDD:369859
PEP_TPR_lipo <513..871 CDD:274350 78/404 (19%)
TPR repeat 514..542 CDD:276809 4/27 (15%)
TPR repeat 547..591 CDD:276809 7/43 (16%)
TPR repeat 598..625 CDD:276809 7/29 (24%)
TPR repeat 630..660 CDD:276809 6/35 (17%)
TPR repeat 665..693 CDD:276809 8/27 (30%)
TPR repeat 737..764 CDD:276809 3/30 (10%)
TPR repeat 803..834 CDD:276809 9/44 (20%)
TPR repeat 839..867 CDD:276809 5/21 (24%)
Odad4NP_083194.2 TPR 1. /evidence=ECO:0000255 11..44
TPR_11 14..76 CDD:290150
TPR repeat 14..39 CDD:276809
TPR repeat 44..74 CDD:276809
TPR 2. /evidence=ECO:0000255 46..78
TPR_11 47..110 CDD:290150
TPR 3. /evidence=ECO:0000255 79..112
TPR repeat 79..107 CDD:276809
TPR 4. /evidence=ECO:0000255 273..309 7/48 (15%)
TPR repeat 309..347 CDD:276809 9/37 (24%)
TPR_12 314..383 CDD:290160 12/68 (18%)
TPR 5. /evidence=ECO:0000255 318..351 7/32 (22%)
TPR 6. /evidence=ECO:0000255 358..391 6/32 (19%)
TPR repeat 358..383 CDD:276809 5/24 (21%)
TPR_12 359..427 CDD:290160 16/68 (24%)
TPR 7. /evidence=ECO:0000255 395..428 10/33 (30%)
TPR_12 396..466 CDD:290160 18/73 (25%)
TPR repeat 429..463 CDD:276809 6/33 (18%)
TPR 8. /evidence=ECO:0000255 435..468 7/35 (20%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 511..624 24/107 (22%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E2759_KOG1124
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

Return to query results.
Submit another query.