DRSC/TRiP Functional Genomics Resources

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Protein Alignment Tmtc3 and Ttc32

DIOPT Version :9

Sequence 1:NP_477246.2 Gene:Tmtc3 / 37401 FlyBaseID:FBgn0020312 Length:926 Species:Drosophila melanogaster
Sequence 2:XP_003750178.1 Gene:Ttc32 / 684830 RGDID:1585566 Length:148 Species:Rattus norvegicus


Alignment Length:177 Identity:37/177 - (20%)
Similarity:58/177 - (32%) Gaps:73/177 - (41%)


- Green bases have known domain annotations that are detailed below.


  Fly   623 AISMRSDYVQAYINRGDILMKLNRTAQAQEVY-----------------EQALLYDNENADIYYN 670
            |::|    .||...|||.       .:|:|:|                 :.|..|:|.....|::
  Rat    15 ALAM----AQARFARGDF-------TEARELYSAFIGQCASHRSKCSPEDLATAYNNRGQTKYFS 68

  Fly   671 LGVVFLEQGKSQQAQVYFNKAIELYPEHEQALLNSAILLQELGGEEARRVSRSRLYKVLENDDQN 735
              |.|.|      |...:..|||:.|..|..                                  
  Rat    69 --VDFYE------AMDDYTSAIEILPNFEVP---------------------------------- 91

  Fly   736 EKVYFNLGMLAMDESSFDEAEQFFKRAIHLKADFRSALFNLALLLAD 782
               |:|.|::......||||.:.||:|:.....|:.|:.:|...:.|
  Rat    92 ---YYNRGLIRYRLGYFDEAVEDFKKALDRNPAFQDAVLSLKQTILD 135

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Tmtc3NP_477246.2 DUF1736 323..396 CDD:369859
PEP_TPR_lipo <513..871 CDD:274350 37/177 (21%)
TPR repeat 514..542 CDD:276809
TPR repeat 547..591 CDD:276809
TPR repeat 598..625 CDD:276809 1/1 (100%)
TPR repeat 630..660 CDD:276809 9/46 (20%)
TPR repeat 665..693 CDD:276809 6/27 (22%)
TPR repeat 737..764 CDD:276809 10/26 (38%)
TPR repeat 803..834 CDD:276809
TPR repeat 839..867 CDD:276809
Ttc32XP_003750178.1 TPR_11 14..86 CDD:290150 21/89 (24%)
TPR repeat 14..48 CDD:276809 10/43 (23%)
TPR repeat 53..84 CDD:276809 10/38 (26%)
TPR_11 55..120 CDD:290150 23/109 (21%)
TPR_1 55..88 CDD:278916 12/40 (30%)
TPR repeat 89..117 CDD:276809 11/64 (17%)
TPR_1 92..120 CDD:278916 10/27 (37%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E2759_KOG1124
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

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