DRSC/TRiP Functional Genomics Resources

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Protein Alignment Tmtc3 and kdm6al

DIOPT Version :10

Sequence 1:NP_477246.2 Gene:Tmtc3 / 37401 FlyBaseID:FBgn0020312 Length:926 Species:Drosophila melanogaster
Sequence 2:NP_001428613.1 Gene:kdm6al / 569207 ZFINID:ZDB-GENE-070112-2002 Length:1356 Species:Danio rerio


Alignment Length:451 Identity:84/451 - (18%)
Similarity:153/451 - (33%) Gaps:146/451 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly   462 LQRRGSLSWQRFSQAALAILLLTH---ALKTHQRNLDWRTEYSLFMSGVHVNQRNAKLYNNVGHA 523
            |:..|.:..:.|.|.....|||..   ||..:||....:::|          .:||.....:|..
Zfish    85 LKAEGKVDPEFFCQLGHFNLLLEEYPKALSAYQRYYSLQSDY----------WKNAAFLYGLGMV 139

  Fly   524 LENEGKFEEALLYFQQAVRIQTDDIGAHINVGRTFNNLKRYAEAEQAYVQAKALFPQAKPGVSYH 588
            ..:...|:.|:..||:.:         :|:.|        ::.|::.:::...:|   |....|.
Zfish   140 YFHYNAFQWAIKAFQEVL---------YIDPG--------FSRAKEIHLRLGLMF---KVNTDYE 184

  Fly   589 ARIAPNHLNVFINLANLIAKNQTRLEEAD------HLYRQAISMRSDYVQAYINRGDILMKLNRT 647
            :.:  .|..:     .||..::..|.:|:      |||.                   :.|.:|.
Zfish   185 SSL--KHFQL-----ALIDSSRCTLSKAEIQFHIAHLYE-------------------IQKRHRA 223

  Fly   648 AQAQEVYEQALLYDNENADIYYNLGVVFLEQGKSQQAQVYFNKAIELYPEHEQALLNSAILLQEL 712
              |:|.||..|                   |.:..|..|                  .|..||:|
Zfish   224 --AKEAYESLL-------------------QTEDLQTPV------------------RAAALQQL 249

  Fly   713 G---------GEEARRVSRS--RLYKVLENDDQNEKVYFNLGMLAMDESSFDEAEQFFKRAIHLK 766
            |         |::|.:.|.:  .|.|.||.|..:.:.::.||..........:|...::::|...
Zfish   250 GWMHHTVEQLGDKANKDSYAIQCLQKSLEADPNSGQSWYFLGRCYSSIGKVQDAFISYRQSIDKS 314

  Fly   767 ADFRSALFNLALLLADTKRPLDAVPFLNQLIRHHPSHVKGLILLGDIYINHMKDLDEAEKCYRSI 831
            ........::.:|.....:|:||:......::...||....:.||.:|          |.|.:  
Zfish   315 EASADTWCSIGVLYQQQNQPMDALQAYICAVQLDHSHAAAWMDLGTLY----------ESCNQ-- 367

  Fly   832 LHYDPHNTQGLHNLCVVFVERKRLAKAAACLQYAQRLAPAEDYIGRHLQIVLARLQKINKL 892
                ||:.    ..|.:...|.:.....|.|  |.|:        ::||....:| ::|.|
Zfish   368 ----PHDA----IKCYINATRSKTCSNTAAL--AARI--------KYLQAQFCKL-RLNSL 409

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Tmtc3NP_477246.2 TMTC_DUF1736 323..396 CDD:462468
TPR 507..762 CDD:440225 47/271 (17%)
TPR repeat 514..542 CDD:276809 6/27 (22%)
TPR repeat 547..591 CDD:276809 6/43 (14%)
TPR repeat 598..625 CDD:276809 7/32 (22%)
TPR repeat 630..660 CDD:276809 7/29 (24%)
LapB 634..896 CDD:442196 51/270 (19%)
TPR repeat 665..693 CDD:276809 3/27 (11%)
TPR repeat 737..764 CDD:276809 3/26 (12%)
TPR repeat 803..834 CDD:276809 6/30 (20%)
TPR repeat 839..867 CDD:276809 5/27 (19%)
kdm6alNP_001428613.1 None
Blue background indicates that the domain is not in the aligned region.

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