DRSC/TRiP Functional Genomics Resources

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Protein Alignment Tmtc3 and spag1a

DIOPT Version :9

Sequence 1:NP_477246.2 Gene:Tmtc3 / 37401 FlyBaseID:FBgn0020312 Length:926 Species:Drosophila melanogaster
Sequence 2:NP_001082875.2 Gene:spag1a / 564953 ZFINID:ZDB-GENE-030131-9443 Length:386 Species:Danio rerio


Alignment Length:214 Identity:43/214 - (20%)
Similarity:85/214 - (39%) Gaps:29/214 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly   523 ALENEGKFEEALLYFQQAVRIQTDDIGAHINVGRTFNNL----------------------KRYA 565
            |.|:..::.:|.:.::..::|......||.:|.|....|                      :::.
Zfish   169 AYESLERYRKAYVDYKTVLQIDISVQAAHDSVHRITKMLIEQDGPDWREKLPEIPAVPLSAQQHR 233

  Fly   566 EAEQAYVQAKALFPQAKPGVSYHARIAPNHLNVFINLANLIAKNQTRLEEADHLYRQAISMRSDY 630
            :.|.:   |:.|..:|:......||.|.....:.....|.:.|| ::.:.|...|.:.::::.:.
Zfish   234 KEEPS---AELLQARAERAEQEKARKAEARFTILKQEGNELVKN-SQFQGASEKYSECLAIKPNE 294

  Fly   631 VQAYINRGDILMKLNRTAQAQEVYEQALLYDNENADIYYNLGVVFLEQGKSQQAQVYFNKAIELY 695
            ...|.||....:||.|.|:|::..:.||..:.:|...:|...:..........|.....:.::|.
Zfish   295 CAIYTNRALCFLKLERFAEAKQDCDSALQMEPKNKKAFYRRALAHKGLKDYLSASTDLQEVLQLD 359

  Fly   696 P---EHEQALLNSAILLQE 711
            |   |.||.|.....||:|
Zfish   360 PNVQEAEQELEMVTNLLRE 378

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Tmtc3NP_477246.2 DUF1736 323..396 CDD:369859
PEP_TPR_lipo <513..871 CDD:274350 43/214 (20%)
TPR repeat 514..542 CDD:276809 3/18 (17%)
TPR repeat 547..591 CDD:276809 10/65 (15%)
TPR repeat 598..625 CDD:276809 5/26 (19%)
TPR repeat 630..660 CDD:276809 10/29 (34%)
TPR repeat 665..693 CDD:276809 2/27 (7%)
TPR repeat 737..764 CDD:276809
TPR repeat 803..834 CDD:276809
TPR repeat 839..867 CDD:276809
spag1aNP_001082875.2 TPR_11 87..157 CDD:290150
TPR repeat 87..112 CDD:276809
TPR repeat 125..155 CDD:276809
TPR_11 128..190 CDD:290150 3/20 (15%)
TPR repeat 160..188 CDD:276809 3/18 (17%)
TPR_11 263..326 CDD:290150 15/63 (24%)
TPR repeat 263..289 CDD:276809 5/26 (19%)
TPR repeat 294..324 CDD:276809 10/29 (34%)
TPR_11 297..360 CDD:290150 14/62 (23%)
TPR_1 297..328 CDD:278916 10/30 (33%)
TPR repeat 329..357 CDD:276809 2/27 (7%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E2759_KOG1124
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.900

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