Sequence 1: | NP_477246.2 | Gene: | Tmtc3 / 37401 | FlyBaseID: | FBgn0020312 | Length: | 926 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_001257856.1 | Gene: | IFIT1 / 3434 | HGNCID: | 5407 | Length: | 478 | Species: | Homo sapiens |
Alignment Length: | 404 | Identity: | 77/404 - (19%) |
---|---|---|---|
Similarity: | 153/404 - (37%) | Gaps: | 119/404 - (29%) |
- Green bases have known domain annotations that are detailed below.
Fly 400 AKTCFTRNLALSRTLIMCLGWMVLPFLPASNLFFPV------GFVVA-------------ERILY 445
Fly 446 MPSMGYC-LLVAYGFEQLQRRG-SLSWQRFSQAALAILLLTHALKTHQRNLDWRTEYSLFMSGVH 508
Fly 509 VNQRNAKLYNNVGHALENEGKFEEALLYFQQAVRIQTDDIGAHINVGRTFNNLKRYAEAEQAYVQ 573
Fly 574 AKALFPQAKPGVSYHARIAPNHLNVFINLANLIAKNQTRLEE----ADHLYRQAISMRSDYVQAY 634
Fly 635 INRGDILMKLNRTAQAQEVYEQAL----LYDNENADIYYNLGVVFLEQGKSQ-QAQVYFNKAIEL 694
Fly 695 YPEHEQALLNSAILLQELGGEEARRVSRSRLYKVLENDDQNEKVYFNLGMLAMDESSFDEAEQFF 759
Fly 760 KRAIHLKADFRSAL 773 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
Tmtc3 | NP_477246.2 | DUF1736 | 323..396 | CDD:369859 | |
PEP_TPR_lipo | <513..871 | CDD:274350 | 52/270 (19%) | ||
TPR repeat | 514..542 | CDD:276809 | 7/27 (26%) | ||
TPR repeat | 547..591 | CDD:276809 | 6/43 (14%) | ||
TPR repeat | 598..625 | CDD:276809 | 4/30 (13%) | ||
TPR repeat | 630..660 | CDD:276809 | 4/33 (12%) | ||
TPR repeat | 665..693 | CDD:276809 | 9/28 (32%) | ||
TPR repeat | 737..764 | CDD:276809 | 7/26 (27%) | ||
TPR repeat | 803..834 | CDD:276809 | |||
TPR repeat | 839..867 | CDD:276809 | |||
IFIT1 | NP_001257856.1 | TPR 1 | 52..85 | ||
TPR_12 | 54..127 | CDD:290160 | |||
TPR repeat | 54..80 | CDD:276809 | |||
TPR 2 | 95..128 | ||||
TPR repeat | 97..123 | CDD:276809 | |||
TPR repeat | 128..170 | CDD:276809 | 5/9 (56%) | ||
TPR 3 | 139..174 | 6/25 (24%) | |||
TPR 4 | 183..216 | 4/32 (13%) | |||
TPR repeat | 216..246 | CDD:276809 | 10/45 (22%) | ||
TPR 5 | 218..249 | 10/46 (22%) | |||
TPR 6 | 251..284 | 9/48 (19%) | |||
TPR repeat | 252..279 | CDD:276809 | 8/33 (24%) | ||
Interaction with the 5'-triphosphate group of PPP-RNA. /evidence=ECO:0000250 | 256..262 | 3/12 (25%) | |||
TPR repeat | 284..335 | CDD:276809 | 11/82 (13%) | ||
TPR 7 | 305..339 | 5/49 (10%) | |||
TPR 8 | 340..373 | 4/32 (13%) | |||
TPR repeat | 340..367 | CDD:276809 | 3/26 (12%) | ||
TPR 9 | 378..412 | 12/37 (32%) | |||
TPR repeat | 378..407 | CDD:276809 | 9/28 (32%) | ||
TPR 10 | 437..470 | 9/37 (24%) | |||
TPR repeat | 437..465 | CDD:276809 | 7/32 (22%) | ||
TPR_1 | 438..470 | CDD:278916 | 9/36 (25%) | ||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 1 | 0.900 | - | - | E2759_KOG1124 | |
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
Isobase | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 0 | 0.000 | Not matched by this tool. | |||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
User_Submission | 0 | 0.000 | Not matched by this tool. | |||
1 | 0.900 |