DRSC/TRiP Functional Genomics Resources

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Protein Alignment Tmtc3 and Ttc16

DIOPT Version :10

Sequence 1:NP_477246.2 Gene:Tmtc3 / 37401 FlyBaseID:FBgn0020312 Length:926 Species:Drosophila melanogaster
Sequence 2:NP_796358.2 Gene:Ttc16 / 338348 MGIID:2443048 Length:824 Species:Mus musculus


Alignment Length:581 Identity:122/581 - (20%)
Similarity:203/581 - (34%) Gaps:155/581 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly   173 SLLFAVHPVHTE--AVTGVVGRAELLSSIC-FLAAFLSYAKSVG-DSGCPRRTNWLTLFGCFGSC 233
            |:||....:|.:  .|...|.|||....:| |.:|..:..::.. |.|..:..|.|...      
Mouse    94 SVLFFSRALHLDPKLVDFYVFRAEAFIQLCDFSSALQNLRRAYSYDPGNNKYLNRLAFV------ 152

  Fly   234 LLASMLCKEQGITIAGICVVYELFVVHQLRPLHLCHF--VLRLFDERTEQQSPKLANPS------ 290
                       :.:.|.| :||           ||.|  .|.:|.:.::.| |:.|:.|      
Mouse   153 -----------LYLQGQC-LYE-----------LCDFQEALCVFLQASDLQ-PQNASFSYRCMAC 193

  Fly   291 --GIRRWSSSTLWKRLSFLVGITLTLLVGR----VYVMGSQLPIFTRFDNPASAADTPERQLTYG 349
              .::|:...        |..||..:..||    ||::.::|..|.:           :.:|   
Mouse   194 LLALKRYHDC--------LALITREVKQGRASADVYILRARLYNFFQ-----------KAKL--- 236

  Fly   350 YLIYLNCWLLLCPSLLCCDWTMGTVPLLQGFTD--SRNITTLLTFLALGAMVAKTCFTRNLALSR 412
                  |:..|..:||..........|||...|  .:::....| ||:...|.:.....|.|:..
Mouse   237 ------CYQDLRSALLLDPLHAQAKGLLQKMVDQAKQSLQDAST-LAVQGKVHRALKCINCAIEN 294

  Fly   413 TLIMCLGWMVLPFLPASNLFFPVGFVVAERILYMPSMGYCLLVAYGFEQLQRRGSLSWQRFSQAA 477
            .          |..|  |.||..|                        .|:||    .|:|..|.
Mouse   295 N----------PLDP--NFFFFRG------------------------TLRRR----LQQFDHAV 319

  Fly   478 LAILLLTHALKTHQRNLDWRTEYSLFMSGVHVNQRNAKLYNNVGHALENEGKFEEALLYFQQAVR 542
            ...|.....:...|.||..:.:..|.::           ||:......|.|.::|.:|...:|:|
Mouse   320 EDFLKAMDMVTDTQDNLVKQAQRQLLLT-----------YNDFAVHCYNHGAYQEGVLLLNKAIR 373

  Fly   543 IQTDDIGAHINVGRTFNNLKRYAEAEQAYVQAKALFPQAKPGVSYHARIAPNHLNVFINLANLIA 607
            .:.::.|.:||.|..|..|...|.||..|.||.||.| ...|.:....:....|       ....
Mouse   374 DEQNEKGLYINRGDCFFQLGNLAFAEADYKQALALSP-LDEGANLRMGVLQEKL-------GFCQ 430

  Fly   608 KNQTRLEEADHLYRQAISMRSDYVQAYINRGDILMKLNRTAQAQEVYEQALLYDNENADIYYNLG 672
            :...:.:.|:..:.:||.......|.|::|......|..|..|:......||.:.|...:...:.
Mouse   431 QKHRQFQTAEEHFSEAIRHSPQKPQYYLHRAKCRQFLQNTLGARLDVATVLLLNPEYPKMAAVMN 495

  Fly   673 VVF--------LEQGKSQQAQVYFNKAIE-----LYPEHE--QALL--NSAILLQELGGEE 716
            .:|        |:...::.|::..::.||     :||:..  |.||  ..|.:|.:|..:|
Mouse   496 TLFPSMTVENVLKSQVAELAKLQLSRMIENGPKNIYPQSTVVQRLLERRKAQVLVKLWKQE 556

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Tmtc3NP_477246.2 TMTC_DUF1736 323..396 CDD:462468 14/74 (19%)
TPR 507..762 CDD:440225 51/227 (22%)
TPR repeat 514..542 CDD:276809 7/27 (26%)
TPR repeat 547..591 CDD:276809 16/43 (37%)
TPR repeat 598..625 CDD:276809 2/26 (8%)
TPR repeat 630..660 CDD:276809 7/29 (24%)
LapB 634..896 CDD:442196 22/100 (22%)
TPR repeat 665..693 CDD:276809 3/35 (9%)
TPR repeat 737..764 CDD:276809
TPR repeat 803..834 CDD:276809
TPR repeat 839..867 CDD:276809
Ttc16NP_796358.2 TPR 72..272 CDD:440225 48/235 (20%)
TPR repeat 75..103 CDD:276809 3/8 (38%)
TPR repeat 108..138 CDD:276809 8/29 (28%)
TPR repeat 143..170 CDD:276809 9/55 (16%)
TPR repeat 183..213 CDD:276809 6/37 (16%)
TPR repeat 218..245 CDD:276809 7/46 (15%)
TPR 292..>474 CDD:440225 50/240 (21%)
TPR repeat 299..327 CDD:276809 12/57 (21%)
TPR repeat 347..373 CDD:276809 7/36 (19%)
TPR repeat 378..408 CDD:276809 12/29 (41%)
NlpI <394..569 CDD:443815 37/171 (22%)
TPR repeat 413..448 CDD:276809 4/41 (10%)
Blue background indicates that the domain is not in the aligned region.

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