DRSC/TRiP Functional Genomics Resources

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Protein Alignment Tmtc3 and ifit15

DIOPT Version :9

Sequence 1:NP_477246.2 Gene:Tmtc3 / 37401 FlyBaseID:FBgn0020312 Length:926 Species:Drosophila melanogaster
Sequence 2:NP_001288040.1 Gene:ifit15 / 322336 ZFINID:ZDB-GENE-030131-1055 Length:429 Species:Danio rerio


Alignment Length:455 Identity:82/455 - (18%)
Similarity:153/455 - (33%) Gaps:149/455 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly   517 YNNVGHALENEGKFEEALLYFQQAVRIQTDDIGAHINVGRTFNNLKRYAEAEQAYVQAKALFPQA 581
            ||.:|...::.|...|||...|:|                            ::.:|.:.....|
Zfish    49 YNLLGFIQKSLGSDREALESLQKA----------------------------ESVIQEQGTEETA 85

  Fly   582 KPGVSYHARIAPNHLNVFINLANL---------IAKNQTRLEEADHLYRQAISMRSDYVQAYIN- 636
                          :.:.:|.||:         :.|::..|||.:.|.|...:.....:...:: 
Zfish    86 --------------VRLLVNKANMAWVHFHLGELEKSRGYLEELEELQRIHPAPPGCPLHPEVSG 136

  Fly   637 -RGDILMKLNRTAQ--AQEVYEQALLYDNENADIYYNLGV------VFLEQGKSQQAQVY--FNK 690
             :|..|:|.|::.:  |.:.::.||..:.|..:.:..|.:      ::.:....|:|::.  ...
Zfish   137 EKGWTLVKFNKSKKRLAIDYFKMALEAEPERKEWHKGLAISMSKACLWYKCTPEQKAEILEKVKT 201

  Fly   691 AIELYPEHEQALLNSAILLQELG---GEEARRVSRSRLYKVLE--NDDQNEKVYFNLGMLAMDES 750
            |.|:.|..   ||..|:.|.:|.   .....|..|..|.:.||  |......:...||.::.|| 
Zfish   202 AAEINPND---LLLQALYLVKLSYVTKVNVEREMRDLLERCLEIVNVPGLNIILKYLGDISFDE- 262

  Fly   751 SFDEAEQFFKRAIHLKADFRSALFNLALLLADTKRPLDAVPFLNQLIRHHPSHVKGLILLGDIY- 814
            |..|.|:|.:|                                      :|..:|.|..|.|.| 
Zfish   263 SIREGERFQER--------------------------------------YPESIKVLKCLADTYK 289

  Fly   815 --------------INHMKDLDEAEK-C------YR-----SILHYDPHNTQGLHNLCVVFVERK 853
                          |...|.::..|| |      :|     :.:||..|||:....:....:..:
Zfish   290 WKVYKMNEDTEERVILARKTIELLEKVCGYNPDSHRAKVALAAMHYYAHNTERADEIYQQLLLEE 354

  Fly   854 RLAK---------AAACLQYAQRLAPAEDYIGRHLQIVLARLQKINKLPESAPERKLAYEDYDPL 909
            .|:.         .|:.|...:|.:.:..:   |::.|......::|.......:|:.:...|||
Zfish   355 ELSPDKWQYIYYCYASYLNQCKRFSESVQF---HIKGVKTPGDSVDKEKSLNILKKIVWRGKDPL 416

  Fly   910  909
            Zfish   417  416

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Tmtc3NP_477246.2 DUF1736 323..396 CDD:369859
PEP_TPR_lipo <513..871 CDD:274350 75/415 (18%)
TPR repeat 514..542 CDD:276809 9/24 (38%)
TPR repeat 547..591 CDD:276809 2/43 (5%)
TPR repeat 598..625 CDD:276809 9/35 (26%)
TPR repeat 630..660 CDD:276809 7/33 (21%)
TPR repeat 665..693 CDD:276809 4/35 (11%)
TPR repeat 737..764 CDD:276809 9/26 (35%)
TPR repeat 803..834 CDD:276809 11/57 (19%)
TPR repeat 839..867 CDD:276809 4/36 (11%)
ifit15NP_001288040.1 TPR_11 <50..>368 CDD:330823 71/401 (18%)
TPR repeat 323..356 CDD:276809 6/32 (19%)
TPR repeat 361..390 CDD:276809 4/31 (13%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E2759_KOG1124
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.900

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