Sequence 1: | NP_477246.2 | Gene: | Tmtc3 / 37401 | FlyBaseID: | FBgn0020312 | Length: | 926 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | XP_006252585.1 | Gene: | Tmtc4 / 290501 | RGDID: | 1560183 | Length: | 773 | Species: | Rattus norvegicus |
Alignment Length: | 809 | Identity: | 268/809 - (33%) |
---|---|---|---|
Similarity: | 406/809 - (50%) | Gaps: | 124/809 - (15%) |
- Green bases have known domain annotations that are detailed below.
Fly 38 LCICVACIVCYYNSTQCGLVFDDISAIRDNKDLRPHTPLINVFLNDFWGTPMRKEQSHKSYRPLT 102
Fly 103 VLTFRFNYLLH-ALEPFGYHLVNLLLHLSVCLLWRRVCRLLL--RQCAASGSNAISAPSSSSVSQ 164
Fly 165 LNTCAFVASLLFAVHPVHTEAVTGVVGRAELLSSICFLAAFLSYAKSVGDSGCPRRTN----WLT 225
Fly 226 LFGCFGSCLLASMLCKEQGITIAGICVVYELFVVHQLRPLHLCHFVLRLFDERTEQQSPKLANPS 290
Fly 291 GIRRWSSSTLWKRLSFLVGITLTLLVGRVYVMGSQLPIFTRFDNPASAADTP-ERQLTYGYLIYL 354
Fly 355 NCWLLLCPSLLCCDWTMGTVPLLQGFTDSRNITTLLTFLALGAMVAKTCFTRNLALSRTLIMCLG 419
Fly 420 WMVLPFLPASNLFFPVGFVVAERILYMPSMGYCLLVAYGFEQLQRRGSLSWQRFSQAALAI-LLL 483
Fly 484 THALKTHQRNLDWRTEYSLFMSGVHVNQRNAKLYNNVGHALENEGKFEEALLYFQQAVRIQTDDI 548
Fly 549 GAHINVGRTFNNLKRYAEAEQAYVQAKALFPQAKPGVSYHARIAPNHLNVFINLANLIAKNQTRL 613
Fly 614 EEADHLYRQAISMRSDYVQAYINRGDILMKLNRTAQAQEVYEQALLYDNENADIYYNLGVVFLEQ 678
Fly 679 GKSQQAQVYFNKAIELYPEHEQALLNSAILLQELGG-EEARRVSRSRLYKVLENDDQNEKVYFNL 742
Fly 743 GMLAMDESSFDEAEQFFKRAIHLKADFRSALFNLALLLADTKRPLDAVPFLNQLIRHHPSHVKGL 807
Fly 808 ILLGDIYINHMKDLDEAEKCYRSILHYDP 836 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
Tmtc3 | NP_477246.2 | DUF1736 | 323..396 | CDD:369859 | 34/73 (47%) |
PEP_TPR_lipo | <513..871 | CDD:274350 | 76/325 (23%) | ||
TPR repeat | 514..542 | CDD:276809 | 9/27 (33%) | ||
TPR repeat | 547..591 | CDD:276809 | 0/43 (0%) | ||
TPR repeat | 598..625 | CDD:276809 | 9/26 (35%) | ||
TPR repeat | 630..660 | CDD:276809 | 8/29 (28%) | ||
TPR repeat | 665..693 | CDD:276809 | 8/27 (30%) | ||
TPR repeat | 737..764 | CDD:276809 | 6/26 (23%) | ||
TPR repeat | 803..834 | CDD:276809 | 7/30 (23%) | ||
TPR repeat | 839..867 | CDD:276809 | |||
Tmtc4 | XP_006252585.1 | DUF1736 | 324..398 | CDD:285594 | 34/73 (47%) |
TPR | 513..771 | CDD:223533 | 76/325 (23%) | ||
TPR_1 | 514..547 | CDD:278916 | 12/80 (15%) | ||
TPR repeat | 514..542 | CDD:276809 | 9/27 (33%) | ||
TPR_17 | 536..569 | CDD:290167 | 12/81 (15%) | ||
TPR repeat | 547..577 | CDD:276809 | 9/30 (30%) | ||
TPR_1 | 582..615 | CDD:278916 | 8/32 (25%) | ||
TPR repeat | 582..610 | CDD:276809 | 8/27 (30%) | ||
TPR repeat | 616..642 | CDD:276809 | 7/25 (28%) | ||
TPR repeat | 650..678 | CDD:276809 | 10/28 (36%) | ||
TPR repeat | 683..713 | CDD:276809 | 8/32 (25%) | ||
TPR_17 | 706..739 | CDD:290167 | 13/67 (19%) | ||
TPR repeat | 718..746 | CDD:276809 | 12/62 (19%) | ||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 1 | 0.900 | - | - | E2759_KOG1124 | |
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 1 | 1.010 | - | - | D1320023at2759 | |
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 1 | 1.000 | - | - | ||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
4 | 3.820 |