DRSC/TRiP Functional Genomics Resources

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Protein Alignment Tmtc3 and F32D1.3

DIOPT Version :10

Sequence 1:NP_477246.2 Gene:Tmtc3 / 37401 FlyBaseID:FBgn0020312 Length:926 Species:Drosophila melanogaster
Sequence 2:NP_504200.1 Gene:F32D1.3 / 178832 WormBaseID:WBGene00017983 Length:774 Species:Caenorhabditis elegans


Alignment Length:852 Identity:226/852 - (26%)
Similarity:384/852 - (45%) Gaps:134/852 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly    36 EFLCICVACIVCYYNSTQCGLVFDDISAIRDNKDLRPHTPLINVFL-NDFWGTPMRKEQSHKSYR 99
            ::|.:.:...:.|..:.....|:||..||..|.|:...||..::.: |||||.|:..:.||||||
 Worm    22 QYLLVALFASIVYRITLNADFVYDDRPAILTNDDVLGRTPWRSLIVHNDFWGNPIGLQGSHKSYR 86

  Fly   100 PLTVLTFRFNYLLHALEPFGYHLVNLLLHLSVCLLWRRVCRLLLRQCAASGSNAISAPSSSSVSQ 164
            ||...:||..:.:|.|:...:|.|||:.|:...:|..:    |.||....|              
 Worm    87 PLITASFRLQFAVHGLKAELFHGVNLICHMINSMLVLK----LARQMRIMG-------------- 133

  Fly   165 LNTCAFVASLLFAVHPVHTEAVTGVVGRAELLSSICFLAAFLSYAKSVGDSGCPRRTNWLTLFGC 229
             |..:.:::|:||.||:.:|||..:||||:|||::..|.|...:...      |.....:.|   
 Worm   134 -NEFSLLSALIFACHPITSEAVCSIVGRADLLSTMLILLAITCHTSD------PSTFRTIVL--- 188

  Fly   230 FGSCLLASMLCKEQGITIAGICVVYELFVVHQLRPLHLCHFVLRLFDERTEQQSPKLANPSGIRR 294
                .:.::..||.||.:..:..:|::                 ||         |.:|....||
 Worm   189 ----SILAVTAKETGIILLPLITLYDV-----------------LF---------KTSNTKQFRR 223

  Fly   295 WSSSTLWKRLSFLVGITLTLLVGRVYVMGSQLPIFTRFDNP-ASAADTPERQLTYGYLIYLNCWL 358
                   ...::|:.: |.|...|:.:...|.|.|::.||| |...::..|.||:.||...:..|
 Worm   224 -------DVTAYLISL-LALCYLRLSINNFQSPKFSKNDNPIAHEPNSLTRALTFMYLPVFHLNL 280

  Fly   359 LLCPSLLCCDWTMGTVPLLQGFTDSRNITTLLTFLALGA---MVAKTCF----TRNLALSRTLIM 416
            ::.|..|..||:|..:|.::...|||   .:|||:.:|.   ::.|...    :.|...:|:|:.
 Worm   281 IVFPKTLSYDWSMDAIPKVESLIDSR---IILTFIVIGVGEHVLLKLLLGLRNSENSHENRSLLF 342

  Fly   417 CLGWMVLPFLPASNLFFPVGFVVAERILYMPSMGYCLLVAYGFEQLQRRGSLSWQRFSQAALAIL 481
            .......|.:.:|||...||||.||||||:.::.||:|.|:..|...:|.|..    |...|.||
 Worm   343 LFALFTTPHILSSNLLTHVGFVAAERILYLNTVAYCILAAFLAEMCSKRSSPK----SVLPLYIL 403

  Fly   482 LLT-HALKTHQRNLDWRTEYSLFMSGVHVNQRNAKLYNNVGHALENEGKFEEALLYFQQAVRIQT 545
            ||: ..::|.||..||:||.|||.|.:.||...|.:  |:|:....:.|:|.|..:::||::.|.
 Worm   404 LLSLFTIRTMQRVDDWKTEESLFKSALEVNPTKANM--NLGYVYTTQKKYELAKYHYRQALKRQG 466

  Fly   546 DDIGAHINVG----RTFNNLKRYAEAEQAYVQAKALFPQAKPGVSYHARIAPNHLNVFINLANLI 606
            :...|..|:|    :|.||........|..:|:::.:..|...::.....|.:|:..|.:|...:
 Worm   467 NLADAWYNLGILTSKTSNNSNGSIHCYQMALQSRSTYAAAHLNLALLLHDAGHHMAAFSHLDKCL 531

  Fly   607 AKNQTRLEEADHLYRQAISMRSDYVQAYINRGDILMKLNRTAQAQEVYEQALL----YDNENADI 667
              |.|    .:.|....::.::....|: |:|.:|.|......|.|.:|.||.    :......:
 Worm   532 --NNT----GEFLKFYHVNRKTQATCAF-NKGRLLQKSGNFHVAIENFELALKLGGPHFEHTPSV 589

  Fly   668 YYNLGVVFLEQGKSQQAQVYFNKAIELYPEHEQALLNSAILLQELGGEEARRVSRSRLYKVLEN- 731
            ..::|..:.|.|..|.|:.:|.|||.  ..|..:.|..|.|          ::.::|.::| || 
 Worm   590 LNSMGTCYNELGDEQSAEKFFGKAIG--ENHVNSYLTMAHL----------KIRQNRSFEV-ENL 641

  Fly   732 -------DDQNEKVYFNLGMLAMDESSFDEAEQFFKRAIHLKADFRSALFNLALLLADTKRPLDA 789
                   ..::..|..|:.:......:::.:..|:::|:||......:|..:|.||..|:..:::
 Worm   642 LRKAMTLAPESVTVLQNIALAEFHMQNYNRSLLFYRKALHLDPTHLDSLQGIANLLQQTQNHVES 706

  Fly   790 VPFLNQLIRHHP----SHVK-GLILLGDIYINHMKDLDEAEKCYRSILHYDPHNTQGLHN--LCV 847
            ..|..:::...|    :|.. |.||    ::|...||  |.|.|...|..||.:.....|  ..:
 Worm   707 ETFYRKVMEAQPNSYAAHANYGAIL----HLNQKYDL--ALKEYEIALILDPTSDVARENRKKVI 765

  Fly   848 VFVERKR 854
            ..:.|||
 Worm   766 RILRRKR 772

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Tmtc3NP_477246.2 TMTC_DUF1736 323..396 CDD:462468 25/73 (34%)
TPR 507..762 CDD:440225 57/270 (21%)
TPR repeat 514..542 CDD:276809 8/27 (30%)
TPR repeat 547..591 CDD:276809 9/47 (19%)
TPR repeat 598..625 CDD:276809 5/26 (19%)
TPR repeat 630..660 CDD:276809 10/33 (30%)
LapB 634..896 CDD:442196 56/240 (23%)
TPR repeat 665..693 CDD:276809 8/27 (30%)
TPR repeat 737..764 CDD:276809 4/26 (15%)
TPR repeat 803..834 CDD:276809 11/31 (35%)
TPR repeat 839..867 CDD:276809 4/18 (22%)
F32D1.3NP_504200.1 TMTC_DUF1736 244..316 CDD:462468 25/74 (34%)
PEP_TPR_lipo <413..>757 CDD:274350 90/371 (24%)
TPR repeat 436..464 CDD:276809 8/29 (28%)
TPR repeat 469..498 CDD:276809 7/28 (25%)
TPR repeat 504..531 CDD:276809 5/26 (19%)
TPR repeat 537..578 CDD:276809 11/41 (27%)
TPR 587..>748 CDD:440225 40/179 (22%)
TPR repeat 587..614 CDD:276809 7/26 (27%)
TPR repeat 619..647 CDD:276809 7/38 (18%)
TPR repeat 655..681 CDD:276809 4/25 (16%)
TPR repeat 686..716 CDD:276809 6/29 (21%)
TPR repeat 721..748 CDD:276809 10/32 (31%)

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