DRSC/TRiP Functional Genomics Resources

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Protein Alignment Tmtc3 and Ifit3

DIOPT Version :10

Sequence 1:NP_477246.2 Gene:Tmtc3 / 37401 FlyBaseID:FBgn0020312 Length:926 Species:Drosophila melanogaster
Sequence 2:XP_011245453.1 Gene:Ifit3 / 15959 MGIID:1101055 Length:434 Species:Mus musculus


Alignment Length:481 Identity:99/481 - (20%)
Similarity:174/481 - (36%) Gaps:160/481 - (33%)


- Green bases have known domain annotations that are detailed below.


  Fly   487 LKTHQRNLDWRTEYSLFMSGVHVNQRNAKLYNNVGHALENEGKFEEALLYFQQAVRIQTDDIGAH 551
            ||.|   ..|    :||..|...:....::.|.|.| |.:|   |:|.:|          |:.|:
Mouse    47 LKCH---FTW----NLFREGSMSSHMEDRVCNQVEH-LNSE---EKATMY----------DLLAY 90

  Fly   552 INVGRTFNNLKRYAEAE-----QAYVQAKALFPQAKPGVSYHARIAP--NHLNVFINLANLIAKN 609
            |          ::.:.|     :...||:.|........|...|:..  |:..::.::.      
Mouse    91 I----------KHLDGESKAALECLGQAEDLRKSEHNDQSEIRRLVTWGNYAWIYYHMG------ 139

  Fly   610 QTRLEEADHLYRQAISMRSDYVQAYINRGDILMKLNRTAQAQEVYEQALLYDNENADIYYNLGVV 674
              ||.||               |||::      |:.:..|     :.|..|..|..::....|..
Mouse   140 --RLSEA---------------QAYVD------KVRQVCQ-----KFANPYSMECPELECEEGWT 176

  Fly   675 FLEQGKSQQAQVYFNKAIELYPEHEQALLNSAILLQELGGEEARRVSRSRLYKVLENDDQNE--K 737
            .|:.|::::|::.|.||:|..|:..:.....||.:..|..:..::.|...|.:.:|.:.||:  |
Mouse   177 RLKCGRNERAKMCFEKALEEKPKDPECSSGMAIAMFRLEEKPEKQFSVDALKQAMELNPQNQYLK 241

  Fly   738 VYFNLGMLAMDESS-------------------FDEAEQFFK------RAIHL--KADFRSALFN 775
            |...|.:|.|.|.:                   ..:|.||:|      |||.|  || .||.:.|
Mouse   242 VLLALKLLRMGEEAEGERLIKDALGKAPNQTDVLQKAAQFYKKKGNLDRAIELLGKA-LRSTVNN 305

  Fly   776 LAL----------LLADTKRPLDA----------------VPFLNQLIRHHPSHVKGLILLGDIY 814
            ..|          :|...:...||                :.|:.:.::...|.:..        
Mouse   306 SPLYSLVMCRYREILEQLQNKGDADSSERRQRMAELRRLTMEFMQKTLQRRRSPLNS-------- 362

  Fly   815 INHMKDLDEAEKCYRSILHYDPHNTQGLHNLCVVFVERKRLAKAAACLQYAQRLAPAEDYIGRHL 879
            .:.:.|..|.|:||:.::..:..:           ||.:.|.:....||...|  .:||      
Mouse   363 YSDLIDFPEVERCYQMVISKESPD-----------VEEEDLYERYCNLQEYHR--KSED------ 408

  Fly   880 QIVLARLQKINKLPESAPERKLAYED 905
               ||.|:.:.:.|.:  ||.:..|:
Mouse   409 ---LAALECLLQFPRN--ERSIEKEE 429

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Tmtc3NP_477246.2 TMTC_DUF1736 323..396 CDD:462468
TPR 507..762 CDD:440225 57/288 (20%)
TPR repeat 514..542 CDD:276809 8/27 (30%)
TPR repeat 547..591 CDD:276809 8/48 (17%)
TPR repeat 598..625 CDD:276809 4/26 (15%)
TPR repeat 630..660 CDD:276809 6/29 (21%)
LapB 634..896 CDD:442196 65/316 (21%)
TPR repeat 665..693 CDD:276809 7/27 (26%)
TPR repeat 737..764 CDD:276809 12/51 (24%)
TPR repeat 803..834 CDD:276809 5/30 (17%)
TPR repeat 839..867 CDD:276809 5/27 (19%)
Ifit3XP_011245453.1 TPR_12 82..157 CDD:315987 21/128 (16%)
TPR repeat 82..110 CDD:276809 8/47 (17%)
TPR repeat 115..154 CDD:276809 11/67 (16%)
TPR 127..368 CDD:440225 55/283 (19%)
TPR repeat 167..195 CDD:276809 7/27 (26%)
TPR repeat 200..233 CDD:276809 5/32 (16%)
TPR repeat 272..300 CDD:276809 10/28 (36%)
Blue background indicates that the domain is not in the aligned region.

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