DRSC/TRiP Functional Genomics Resources

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Protein Alignment Tmtc3 and tmtc3

DIOPT Version :10

Sequence 1:NP_477246.2 Gene:Tmtc3 / 37401 FlyBaseID:FBgn0020312 Length:926 Species:Drosophila melanogaster
Sequence 2:XP_031754762.1 Gene:tmtc3 / 100145573 XenbaseID:XB-GENE-5884137 Length:927 Species:Xenopus tropicalis


Alignment Length:11 Identity:5/11 - (45%)
Similarity:7/11 - (63%) Gaps:0/11 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly    18 EPLDQQFNCPF 28
            |.:|.:|.|.|
 Frog   297 EIIDGKFGCCF 307

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Tmtc3NP_477246.2 TMTC_DUF1736 323..396 CDD:462468
TPR 507..762 CDD:440225
TPR repeat 514..542 CDD:276809
TPR repeat 547..591 CDD:276809
TPR repeat 598..625 CDD:276809
TPR repeat 630..660 CDD:276809
LapB 634..896 CDD:442196
TPR repeat 665..693 CDD:276809
TPR repeat 737..764 CDD:276809
TPR repeat 803..834 CDD:276809
TPR repeat 839..867 CDD:276809
tmtc3XP_031754762.1 TMTC_DUF1736 261..326 CDD:462468 5/11 (45%)
TPR 442..671 CDD:440225
TPR repeat 448..478 CDD:276809
TPR repeat 483..509 CDD:276809
TPR repeat 533..560 CDD:276809
TPR repeat 565..595 CDD:276809
LapB 569..805 CDD:442196
TPR repeat 600..628 CDD:276809
TPR repeat 671..700 CDD:276809
TPR repeat 705..733 CDD:276809
TPR repeat 739..768 CDD:276809
TPR repeat 774..797 CDD:276809
Blue background indicates that the domain is not in the aligned region.

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