DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment ktub and TUB

DIOPT Version :9

Sequence 1:NP_611549.2 Gene:ktub / 37400 FlyBaseID:FBgn0015721 Length:469 Species:Drosophila melanogaster
Sequence 2:NP_003311.2 Gene:TUB / 7275 HGNCID:12406 Length:561 Species:Homo sapiens


Alignment Length:519 Identity:225/519 - (43%)
Similarity:300/519 - (57%) Gaps:83/519 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 GINSRNQKMEQQRQLMEAYIRQKRASPGMVQASDLQINRPMSGMRSNSRELHAYDGPM--QFISS 65
            |.|.|.||:::||.|:|...::||..|.||||:  ...||.|.....|.|    ..|:  .::||
Human    74 GRNLRQQKLDRQRALLEQKQKKKRQEPLMVQAN--ADGRPRSRRARQSEE----QAPLVESYLSS 132

  Fly    66 P-------QNPDQILTNGSPGGINPVAMNTSRN-----HSNNMRSLSTINQEGKWSYTPRKADLI 118
            .       |..|. |.:...|...|.|..:::.     .:......:...::||...|...|.|.
Human   133 SGSTSYQVQEADS-LASVQLGATRPTAPASAKRTKAAATAGGQGGAARKEKKGKHKGTSGPAALA 196

  Fly   119 EEISSHELEDEESSPVTVI----EQHQQSASHSA------------NSTQSQKPRARQHSFSDNL 167
            |:      :.|...||.::    ..|.|.|..:|            .:|..:|..:...||.:: 
Human   197 ED------KSEAQGPVQILTVGQSDHAQDAGETAAGGGERPSGQDLRATMQRKGISSSMSFDED- 254

  Fly   168 DEDDYTN-------------RNVAGAAPVRPAGMASSPYKDATLDGSSNGTGNGTGGESEGDV-I 218
            :||:..|             .:......||.|..|.||                |..|...|| :
Human   255 EEDEEENSSSSSQLNSNTRPSSATSRKSVREAASAPSP----------------TAPEQPVDVEV 303

  Fly   219 GNIDQFVMQPAPQGVLYKCRITRDRKGMDRGLFPIYYLHLERDYGKKIFLLGGRKRKKSKTSNYI 283
            .::::|.::|||||:..|||||||:||||||::|.|:|||:|:.|||:|||.||||||||||||:
Human   304 QDLEEFALRPAPQGITIKCRITRDKKGMDRGMYPTYFLHLDREDGKKVFLLAGRKRKKSKTSNYL 368

  Fly   284 VSCDPTDLSRNADGFCGKLRSNVFGTSFTVFDNG-NKESTESP-------RLDLAVIIYDTNILG 340
            :|.|||||||..|.:.||||||:.||.|||:||| |.:...|.       |.:||.:.|:||:||
Human   369 ISVDPTDLSRGGDSYIGKLRSNLMGTKFTVYDNGVNPQKASSSTLESGTLRQELAAVCYETNVLG 433

  Fly   341 FKGPRNMTVILPGMTEDDQRVKISSADPKQQGILDLWKMKNMDNIVELHNKTPVWNDETQSYVLN 405
            |||||.|:||:|||....:||.|...: :.:.:|..|:.||.::|:||.||||||||:|||||||
Human   434 FKGPRKMSVIVPGMNMVHERVSIRPRN-EHETLLARWQNKNTESIIELQNKTPVWNDDTQSYVLN 497

  Fly   406 FHGRVTQASVKNFQLVHDSDPEYIVMQFGRTSEDVFTMDYRYPLCAMQAFAIALSSFDGKIACE 469
            ||||||||||||||::|.:||:||||||||.:||||||||.|||||:|||||||||||.|:|||
Human   498 FHGRVTQASVKNFQIIHGNDPDYIVMQFGRVAEDVFTMDYNYPLCALQAFAIALSSFDSKLACE 561

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ktubNP_611549.2 Tub 228..462 CDD:279506 157/241 (65%)
TUBNP_003311.2 Tub_N 84..292 CDD:292938 49/221 (22%)
Tub 313..554 CDD:279506 157/241 (65%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 336 1.000 Domainoid score I1121
eggNOG 1 0.900 - - E1_KOG2502
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 369 1.000 Inparanoid score I2142
Isobase 1 0.950 - 0 Normalized mean entropy S3334
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1445357at2759
OrthoFinder 1 1.000 - - FOG0000431
OrthoInspector 1 1.000 - - otm41820
orthoMCL 1 0.900 - - OOG6_101683
Panther 1 1.100 - - LDO PTHR16517
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R2866
SonicParanoid 1 1.000 - - X288
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
User_Submission 00.000 Not matched by this tool.
1413.810

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