DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment ktub and Tulp3

DIOPT Version :9

Sequence 1:NP_611549.2 Gene:ktub / 37400 FlyBaseID:FBgn0015721 Length:469 Species:Drosophila melanogaster
Sequence 2:XP_008761560.2 Gene:Tulp3 / 688749 RGDID:1585259 Length:503 Species:Rattus norvegicus


Alignment Length:502 Identity:213/502 - (42%)
Similarity:281/502 - (55%) Gaps:101/502 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly     7 RNQKMEQQRQLMEAYIRQKRASPGMVQAS-DLQINR----------PMSGMRSNSRE--LHAYDG 58
            |..|::.||.|:|...|:||..|.|||.: :.::.|          |:...::...:  ||..||
  Rat    64 RQLKLDNQRALLEKKQRKKRLEPLMVQPNPEARLRRLKPRGSEEHTPLVDPQTPCSDVILHGIDG 128

  Fly    59 PMQFISSPQNPD-----QIL-----------TNGSPGGINPVAMNTSRNHSNNMRSLSTINQEGK 107
            |..|: .|:..|     |:|           |.||..|.:||.                      
  Rat   129 PAAFL-KPEAQDLESKPQVLSVGSSPTPEEGTEGSADGESPVE---------------------- 170

  Fly   108 WSYTPRKADLIEEISSHELEDEESSPVTVIEQHQQSASHSANSTQSQKPRARQHSFSDNLDEDDY 172
               |..|.||.|.:..|.:    .|.|...|:..:.|.....:..|...::.:.|          
  Rat   171 ---TASKPDLQEILQKHGI----LSSVNYDEEPDEEAEDEGENLSSLPAQSEKES---------- 218

  Fly   173 TNRNVAGAAPVRPAGMASSPYKDATLDGSSNGTGNGTGGESEGDVIGNIDQFVMQPAPQGVLYKC 237
                         ||.:.....|....|.:...|:...||.|     |::.|...|||:||..||
  Rat   219 -------------AGASQKAASDTGASGMTAQQGDAQLGEVE-----NLEDFAYSPAPRGVTVKC 265

  Fly   238 RITRDRKGMDRGLFPIYYLHLERDYGKKIFLLGGRKRKKSKTSNYIVSCDPTDLSRNADGFCGKL 302
            |:|||:|||||||||.||:|||::..:|||||.||||||||||||:||.|||||||..:.:.|||
  Rat   266 RVTRDKKGMDRGLFPTYYMHLEKEENRKIFLLAGRKRKKSKTSNYLVSTDPTDLSREGESYIGKL 330

  Fly   303 RSNVFGTSFTVFDNG----------NKESTESPRLDLAVIIYDTNILGFKGPRNMTVILPGMTED 357
            |||:.||.|||:|:|          .|..|   |.:||.|.|:||:|||||||.|:||:|||..:
  Rat   331 RSNLMGTKFTVYDHGVNPVKAQGLVEKAHT---RQELAAICYETNVLGFKGPRKMSVIIPGMNMN 392

  Fly   358 DQRVKISSADPKQQGILDLWKMKNMDNIVELHNKTPVWNDETQSYVLNFHGRVTQASVKNFQLVH 422
            .:|:.....: :.:.:|..|:.|:|:|::|||||.|||||:|||||||||||||||||||||:||
  Rat   393 HERIPFRPRN-EHESLLSKWQNKSMENLIELHNKAPVWNDDTQSYVLNFHGRVTQASVKNFQIVH 456

  Fly   423 DSDPEYIVMQFGRTSEDVFTMDYRYPLCAMQAFAIALSSFDGKIACE 469
            .:||:||||||||.::||||:||.|||||:|||||.|||||.|:|||
  Rat   457 GNDPDYIVMQFGRVADDVFTLDYNYPLCALQAFAIGLSSFDSKLACE 503

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ktubNP_611549.2 Tub 228..462 CDD:279506 153/243 (63%)
Tulp3XP_008761560.2 Tub_N 70..233 CDD:406673 44/215 (20%)
Tub 255..498 CDD:395929 155/246 (63%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 334 1.000 Domainoid score I1090
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H20711
Inparanoid 1 1.050 374 1.000 Inparanoid score I2033
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1445357at2759
OrthoFinder 1 1.000 - - FOG0000431
OrthoInspector 1 1.000 - - otm45959
orthoMCL 1 0.900 - - OOG6_101683
Panther 1 1.100 - - O PTHR16517
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X288
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
1110.970

Return to query results.
Submit another query.