DRSC/TRiP Functional Genomics Resources

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Protein Alignment ktub and Oseg4

DIOPT Version :9

Sequence 1:NP_611549.2 Gene:ktub / 37400 FlyBaseID:FBgn0015721 Length:469 Species:Drosophila melanogaster
Sequence 2:NP_001261278.1 Gene:Oseg4 / 38219 FlyBaseID:FBgn0035264 Length:1205 Species:Drosophila melanogaster


Alignment Length:412 Identity:74/412 - (17%)
Similarity:140/412 - (33%) Gaps:123/412 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly    81 INPVAMNTSRNHSN----NMRSLSTINQEGKW---SYTPRKADLIEEISSHELEDEESSPVTVIE 138
            |..:|::|..|.||    .:..|...|..|..   .||..:...: .|:|..:.......:.:..
  Fly   407 IKEIALSTLENRSNPADDRVYQLLLCNSIGTTVDSKYTDIRPCFV-GINSSYVAIASQEEILIWH 470

  Fly   139 QHQQSASHSANSTQSQKPRARQHSFSDNLDEDDYTNRNVAGAAPVRPAGMASSPYKDATLDGSSN 203
            .|...::.:.::.:::|.: |.|.       ||            .|.|:..:  ||..| .||:
  Fly   471 YHTPKSASTLHNVKARKEK-RFHI-------DD------------TPTGVEMA--KDLML-SSSS 512

  Fly   204 GTGNGTGGESEGDVIGNIDQFVMQPAPQGVLYKCRITRDRK----GMDRGLFPIYYLHLERDYGK 264
            |.|:.|            .:.:..|.       |.:....|    ..:.|..        .:|..
  Fly   513 GDGHST------------QRGISDPI-------CALALSEKLLLVARESGAI--------NEYSI 550

  Fly   265 KIFLLGGRKRKKSKTSNYIVSCDPT--------------DLSRNAD---GFCGKLRSNVFGTSFT 312
            ....|..|....:|.....::|:.|              ||..|.:   .|....|.:|:..|: 
  Fly   551 ANVALRNRHLMNAKVYKMAINCNSTRAAIIDHMGVMTLLDLDDNRETQLNFSRVERKDVWAVSW- 614

  Fly   313 VFDNGNKESTESPRLDLAVIIYDTNILGFKG--PRNMTVILPGMTEDDQRVKISSADPKQQGILD 375
                    :|::|.  |..::..|.:..|:|  |.. .|...|.....:.::|:|.  ....|:.
  Fly   615 --------ATDNPL--LLALMEKTRMYIFRGNDPEE-PVSCSGYICTFEDLEITSV--LLDDIIS 666

  Fly   376 LWKMKNMDNIVELHNKTPVWNDETQSYV----------LNFHGR----VTQASVKNFQLVHDSDP 426
            :.:::|..:|::|..|:....|:...:|          .|.|.|    :.::::|..:|      
  Fly   667 VGELQNFSHIIQLRVKSLRDTDDLLEHVGLEDAKQFIEDNPHPRLWRLLAESALKKLEL------ 725

  Fly   427 EYIVMQFGRTSEDVFTMDYRYP 448
                    .|:|:.|.....||
  Fly   726 --------ETAENAFVRCAHYP 739

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ktubNP_611549.2 Tub 228..462 CDD:279506 45/258 (17%)
Oseg4NP_001261278.1 WD40 <7..217 CDD:225201
WD40 <18..242 CDD:295369
WD40 repeat 19..70 CDD:293791
WD40 repeat 76..115 CDD:293791
WD40 repeat 119..152 CDD:293791
WD40 repeat 161..202 CDD:293791
WD40 repeat 212..280 CDD:293791
WD40 repeat 290..333 CDD:293791
WD40 341..687 CDD:225201 62/344 (18%)
TPR repeat 815..838 CDD:276809
TPR repeat 839..864 CDD:276809
TPR repeat 869..894 CDD:276809
YscO 877..980 CDD:284686
DUF3505 1163..>1188 CDD:288836
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45443582
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR16517
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
22.030

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