DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment ktub and Tulp2

DIOPT Version :9

Sequence 1:NP_611549.2 Gene:ktub / 37400 FlyBaseID:FBgn0015721 Length:469 Species:Drosophila melanogaster
Sequence 2:XP_006229165.2 Gene:Tulp2 / 361576 RGDID:1310551 Length:562 Species:Rattus norvegicus


Alignment Length:545 Identity:198/545 - (36%)
Similarity:289/545 - (53%) Gaps:93/545 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly     2 SGINSRNQKMEQQRQLMEAYIRQKRASPGMVQA---SDLQINRPMSG------------------ 45
            ||:  |.||:||||||.|...|:||..|.||||   :.|:..||..|                  
  Rat    30 SGV--RLQKLEQQRQLFEKKQRRKRQEPLMVQANPDASLRHRRPRRGEERFQSDSSWGLGVGSPF 92

  Fly    46 MRSNSRELHAYDG------PMQFIS----------SPQNPDQILTNGSPGGINPVAMNTSRNHSN 94
            ::.|..:.|...|      .|.::.          ||:.  .:.|.|:...:..:......:.|:
  Rat    93 LQENVPQAHLPSGAHSALVTMSYVGDGSGERAPLLSPRG--AVYTRGNGPAVRHLCWLPDSSDSD 155

  Fly    95 ----NMRSLSTINQEGKWSYTPRKADLIEEISSHELEDEESSPVTVIEQHQQSASHSANSTQSQK 155
                .|..:..|::..|.....|:...:........|:||..|... ....::.|...:.|:: .
  Rat   156 VEEVTMEDIPVISRPPKTHLANRRRGWLASPGPGISEEEEVEPKDA-RVEDKTPSPDPDPTEN-S 218

  Fly   156 PRARQHSFSDNLDEDDYTNRNVAGAAPVRPAGMASSPYKDATLDGSSNGT--------GNG---- 208
            .|....|.|.|::|:. ..:|:..|:.:   |......|:||....:|..        |:|    
  Rat   219 DRVHGDSASCNMEENT-AKKNIETASGI---GDEDPEKKEATESTETNNALVASKVLQGDGDTSN 279

  Fly   209 ------------TGGESEGDVIGNIDQFVMQPAPQGVLYKCRITRDRKGMDRGLFPIYYLHLERD 261
                        |.|...|:   :::.:|:.|||:..:.:|||.|::.|:|:|:||.|||:||.:
  Rat   280 HSAWNMTCPMPRTPGPRLGE---DMEAYVLLPAPREHMVQCRIVRNKHGVDKGMFPSYYLYLEAE 341

  Fly   262 YGKKI-------FLLGGRKRKKSKTSNYIVSCDPTDLSRNADGFCGKLRSNVFGTSFTVFDNG-N 318
            .|..:       |||.|||||:||||||::|.||.|:|||.:.|.||:||||.||.||:|||| |
  Rat   342 DGVAVRSSPLGHFLLAGRKRKRSKTSNYLISLDPKDMSRNGNNFVGKVRSNVLGTKFTIFDNGVN 406

  Fly   319 KEST----ESPRL--DLAVIIYDTNILGFKGPRNMTVILPGMTEDDQRVKISSADPKQQGILDLW 377
            .|..    :|.|:  :|.|:.|:||:|||:|||.||||||||....||:|:...: .|..||...
  Rat   407 PERNYWIPDSARIREELGVVCYETNVLGFRGPRKMTVILPGMDSRKQRMKVQPQN-DQDSILSRV 470

  Fly   378 KMKNMDNIVELHNKTPVWNDETQSYVLNFHGRVTQASVKNFQLVHDSDPEYIVMQFGRTSEDVFT 442
            :......::.|.||.|.|:||:.:||||||||||:|||||||:||..:|:::|:||||.:.::||
  Rat   471 QKGARHGLLLLQNKAPSWSDESGAYVLNFHGRVTRASVKNFQIVHPDEPDHLVLQFGRVAPNIFT 535

  Fly   443 MDYRYPLCAMQAFAIALSSFDGKIA 467
            ||:|||||.:|||||.|||||||:|
  Rat   536 MDFRYPLCPLQAFAICLSSFDGKLA 560

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ktubNP_611549.2 Tub 228..462 CDD:279506 131/247 (53%)
Tulp2XP_006229165.2 None


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C166337334
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG2502
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1445357at2759
OrthoFinder 1 1.000 - - FOG0000431
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR16517
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X288
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
87.850

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