DRSC/TRiP Functional Genomics Resources

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Protein Alignment ktub and tub-1

DIOPT Version :9

Sequence 1:NP_611549.2 Gene:ktub / 37400 FlyBaseID:FBgn0015721 Length:469 Species:Drosophila melanogaster
Sequence 2:NP_495710.1 Gene:tub-1 / 174312 WormBaseID:WBGene00006655 Length:426 Species:Caenorhabditis elegans


Alignment Length:499 Identity:194/499 - (38%)
Similarity:273/499 - (54%) Gaps:103/499 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MSGINSR--NQKMEQQRQLMEAYIRQKR-ASPGMVQASDLQINRPMSGMRSNS-RELHAYDGPMQ 61
            |:..||:  ...:::||:::|...:||| .|.|.|:.:.       :.|..|| ::...:|..:.
 Worm     1 MTDTNSQWIEMNLQRQRKMLEDKQKQKRHQSAGSVRTTS-------TAMSMNSMKDYPTFDNSLP 58

  Fly    62 FISSPQNPDQILTNGSPGGINPVAMNTSRNHSNNMRSLSTINQEGKWSYTPRKADLIEEISSHEL 126
            |        .|..|.|..    |:|||..     :.:...|.|       ||.            
 Worm    59 F--------SISDNSSVS----VSMNTPL-----IPTQDPIAQ-------PRM------------ 87

  Fly   127 EDEESSPVTVIEQHQQS----ASHSANSTQSQKPRARQHS--FSDNLDEDDYTNRNVAGAAPVRP 185
               :|.|....:|.|:|    ..:..|...::..:....|  .||:.|||              .
 Worm    88 ---QSMPRQQPQQVQESLISIGDYPDNDINAKLSKVNLTSCVVSDDEDED--------------K 135

  Fly   186 AGMASSPYK-DATLDGSSNGTGNGTGGESEGDVI-------GNIDQFVMQPAPQGVLYKCRITRD 242
            ...|.||:. |...|            ....:|:       .|:.:||..||.:..||||.|||.
 Worm   136 RSYADSPWNTDVVAD------------RIPSEVLPDYNFIKNNLAKFVEDPAVEHCLYKCSITRQ 188

  Fly   243 RKGMDRGLFPIYYLHLER---DYGKKIFLLGGRKRKKSKTSNYIVSCDPTDLSRNADGFCGKLRS 304
            :.|:|:|:||.|:||||.   |..:|||||..||||||.|:||::|.|||:|||..:|:|.|:||
 Worm   189 KSGVDKGMFPTYFLHLEEFDTDKRQKIFLLAARKRKKSTTANYLLSTDPTNLSREGEGYCAKVRS 253

  Fly   305 NVFGTSFTVFDNGN--KESTE--SPRLDLAVIIYDTNILGFKGPRNMTVILPGM---TEDDQRVK 362
            |..||.|||:|:|.  |::|.  :.|.:||.:||:||:|||||||.||:::||:   ||:...|:
 Worm   254 NALGTQFTVYDSGQNPKKTTNHAAIRQELAAVIYETNVLGFKGPRKMTIVMPGIEPPTENRPAVR 318

  Fly   363 ISSADPKQ--QGILDLWKMKNMDNIVELHNKTPVWNDETQSYVLNFHGRVTQASVKNFQLVHDSD 425
             ....|.|  ..:|:.:::.::|::..|.||:|.|||||||||||||||||||||||||::|.|.
 Worm   319 -CPVRPIQDKHTLLERYRLNDLDSLKILSNKSPQWNDETQSYVLNFHGRVTQASVKNFQIIHQSS 382

  Fly   426 PEYIVMQFGRTSEDVFTMDYRYPLCAMQAFAIALSSFDGKIACE 469
            ||||||||||.|:|.||||:||||.|:|||.||::||.||:|||
 Worm   383 PEYIVMQFGRISDDEFTMDFRYPLSAVQAFGIAMTSFHGKLACE 426

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ktubNP_611549.2 Tub 228..462 CDD:279506 138/245 (56%)
tub-1NP_495710.1 Tub 174..419 CDD:279506 138/245 (56%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 279 1.000 Domainoid score I898
eggNOG 1 0.900 - - E1_KOG2502
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 297 1.000 Inparanoid score I1655
Isobase 1 0.950 - 0 Normalized mean entropy S3334
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1445357at2759
OrthoFinder 1 1.000 - - FOG0000431
OrthoInspector 1 1.000 - - oto18533
orthoMCL 1 0.900 - - OOG6_101683
Panther 1 1.100 - - LDO PTHR16517
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R2866
SonicParanoid 1 1.000 - - X288
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
1413.810

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