DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment ktub and tulp3

DIOPT Version :9

Sequence 1:NP_611549.2 Gene:ktub / 37400 FlyBaseID:FBgn0015721 Length:469 Species:Drosophila melanogaster
Sequence 2:NP_001116953.1 Gene:tulp3 / 100144732 XenbaseID:XB-GENE-979585 Length:509 Species:Xenopus tropicalis


Alignment Length:511 Identity:221/511 - (43%)
Similarity:303/511 - (59%) Gaps:71/511 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly     7 RNQKMEQQRQLMEAYIRQKRASPGMVQAS-DLQINRPMSG--------MRSNSRE-------LHA 55
            |:.|:|.||.|:|...|:||....|||:: |.:..||.||        ::|..::       |:.
 Frog    22 RHLKLENQRTLLEQKQRKKRQEILMVQSNRDTRQRRPKSGKCEEQAPLVQSQKQKSVNCNVILNG 86

  Fly    56 YDGPMQFISSP----QNPDQILTNGSPGGINPVAMNTSRNHSNNMRSLSTINQEGKWSYTPRKAD 116
            .|||..|:.|.    .:..|:||.|.........:.|.....|..|: |..|.|.:.  ||    
 Frog    87 IDGPAAFLDSGFHELDSKIQVLTVGESCTDTDFNVGTGWPSCNEGRA-SPCNSERRG--TP---- 144

  Fly   117 LIEEISSHELEDEESS-PVTVI-----EQHQQSASHSA------NSTQSQKPRARQHSFSDNL-- 167
                     :.|||:: |:..|     |:.||:::...      .|.:..:...::...||:|  
 Frog   145 ---------VSDEENTQPLNSIGRSNLEKTQQNSNRQEILRKPDVSKRDLQELLQERGISDSLNF 200

  Fly   168 -----DEDDYTNRNVAGAAPVRPAGMASSPYKDATLDGSSNGTGNGTGGESEGDV--IGNIDQFV 225
                 |:||..:.:.|..|..|||..:|.  |..|    ..||......:..||:  ||::.:|.
 Frog   201 DEDISDDDDGDDDDEACNASTRPASASSK--KSLT----ETGTAEAVPPDPSGDIGEIGDLKEFA 259

  Fly   226 MQPAPQGVLYKCRITRDRKGMDRGLFPIYYLHLERDYGKKIFLLGGRKRKKSKTSNYIVSCDPTD 290
            ::|||:||:.|.||:||:|||||||:|.||:|||||..:|:|||.|||||:||||||::|.||||
 Frog   260 LRPAPRGVVIKTRISRDKKGMDRGLYPTYYMHLERDNNRKVFLLAGRKRKRSKTSNYLISIDPTD 324

  Fly   291 LSRNADGFCGKLRSNVFGTSFTVFDNGNKE-------STESPRLDLAVIIYDTNILGFKGPRNMT 348
            |||....|.||||||:.||.||::|||...       |..:.|.::|.:.|:||:|||||||.||
 Frog   325 LSREGGNFIGKLRSNLMGTKFTIYDNGESPAKVQGHMSNPTTRQEMAAVCYETNVLGFKGPRKMT 389

  Fly   349 VILPGMTEDDQRVKISSADPKQQGILDLWKMKNMDNIVELHNKTPVWNDETQSYVLNFHGRVTQA 413
            |::|||..:.:|:.....: ..:.:|..|..|..:||:|||||.|||||:|||||||||||||.|
 Frog   390 VLIPGMNLNHERIPFQPQN-DSESLLSRWGNKCQENIIELHNKAPVWNDDTQSYVLNFHGRVTHA 453

  Fly   414 SVKNFQLVHDSDPEYIVMQFGRTSEDVFTMDYRYPLCAMQAFAIALSSFDGKIACE 469
            ||||||:|||:||:||||||||.:||.||:||.|||||:|||::||||||.|:|||
 Frog   454 SVKNFQIVHDNDPDYIVMQFGRVAEDFFTLDYSYPLCALQAFSVALSSFDSKLACE 509

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ktubNP_611549.2 Tub 228..462 CDD:279506 147/240 (61%)
tulp3NP_001116953.1 Tub_N 28..245 CDD:292938 59/238 (25%)
Tub 262..502 CDD:279506 147/240 (61%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 343 1.000 Domainoid score I1059
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 1 1.000 - - H20711
Inparanoid 1 1.050 380 1.000 Inparanoid score I2015
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1445357at2759
OrthoFinder 1 1.000 - - FOG0000431
OrthoInspector 1 1.000 - - otm49046
Panther 1 1.100 - - O PTHR16517
Phylome 00.000 Not matched by this tool.
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R2866
SonicParanoid 1 1.000 - - X288
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
99.190

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