DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG9394 and SNC4

DIOPT Version :10

Sequence 1:NP_611548.1 Gene:CG9394 / 37399 FlyBaseID:FBgn0034588 Length:679 Species:Drosophila melanogaster
Sequence 2:NP_001323206.1 Gene:SNC4 / 843016 AraportID:AT1G66980 Length:1147 Species:Arabidopsis thaliana


Alignment Length:683 Identity:138/683 - (20%)
Similarity:232/683 - (33%) Gaps:205/683 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly    46 LKRNAPLVF---NFTLTLPDADQLASFERPALVGNLPVLGAW------QAGRAVLLNRTAILNVW 101
            |..:||||.   .|:...||: .||:::. |:|.::..:..|      :.|..:......:.|. 
plant    46 LSGDAPLVIARGGFSGLFPDS-SLAAYQF-AMVVSVADVVLWCDVQLTKDGHGICFPDLNLANA- 107

  Fly   102 SASVEIPQNSSVEYRYFAAAVGQSGAVQIRRW------ESHVQARTFNTTKFSGNRSDEFGLIGN 160
            |.|.|:..|....|        ....|..:.|      .:.:|...|:..:...:||.:|    :
plant   108 SNSEEVYPNRQKSY--------PVNGVTTKGWFPIDFSLTELQKVLFSLIRGILSRSGKF----D 160

  Fly   161 ERQLSRGWLQDSGNILQLKLF-----------REALSLE---------------EQPEV------ 193
            |...|...:|:....::..||           :..||:.               ..|||      
plant   161 ENGYSISTVQNVATQMKPALFWLNVQHDEFYEQHNLSMSSFLLSTSRTVSIDFISSPEVNFFRKI 225

  Fly   194 ----------------GQEKLRLRLQPVDPKTLAPILSSARANVEYVR-MAYGDSKLRVQPEYGV 241
                            |:|.    .:|...:|...|||    |:.:|: .|.|   :.|...|.:
plant   226 AGGFGNNGPSFVFQFMGKED----FEPTTNRTYGSILS----NLSFVKTFASG---ILVPKSYIL 279

  Fly   242 PYATGDILMFHVNLEQLDRVAYLVEVYAEQPDEDLVRLLGYS------HLL-----HTSFSGTEG 295
            |......|:.|.:|.|....|.| ::||.....|:.....||      :|.     :.|..|...
plant   280 PLDDKQYLLPHTSLVQDAHKAGL-KLYASGFANDVDIAYNYSWDPVSEYLSFVDNGNFSVDGMLS 343

  Fly   296 D------VSIDLISPLWQRVVGQ-------------LRIEYLHIR-PMEKDGFDLRTSFANYWRS 340
            |      .|:|..|.:.:....|             |.||..|.. ||.:...|.          
plant   344 DFPLTASASVDCFSHIGRNATKQGNECNLLYISFLFLLIEQKHYHLPMVRASVDF---------- 398

  Fly   341 NWTALEIGHRGLGKSLTVTTNAAPLIENTVATMLASSEL---GADLVEFDVQLTSDLVPIIHHDF 402
                           |.::.|.|. .|....|.||..:.   |:|:::..||::||.:|..    
plant   399 ---------------LVISKNGAS-GEYPGCTKLAYEKAIKDGSDVIDCPVQMSSDGIPFC---- 443

  Fly   403 SIRVCIDSKTPTSKDDL--TEVLLKDISYEQLKDLKTYQIVGNKI------VEYPAHNN--VEPP 457
            |..:.:.:.|...:..|  ..:::.:||  .:..:.|:.:..::|      :..|...|  ...|
plant   444 SSSIDLVNSTTVGQTHLRNRSIIVPEIS--SVAGIFTFSLTWHEIQSLTPAISNPFRENGMSRNP 506

  Fly   458 EQRLFPTLQDFFERVNLS------TGFDIEIKWPQQRADGLFESEQTLDKNLFADRILAVVRR-- 514
            .:|....|...:|.:||:      :|..|.:           |:...|.:....|.:..|:.|  
plant   507 NERNSGNLISLYEFLNLAKNSTSLSGILISL-----------ENVVYLREKKGLDVVKVVLNRLT 560

  Fly   515 ---HGCGRLNVIKSFDADLCSLLRFK-QHMYPVLFLSSSKENVFNDPRTSTVEQSVNFAQAFDLG 575
               :..|.|.|:......|. |:.|| |..|..::  ..||.:.| ...|.:|....||.|..:.
plant   561 ETGYIVGTLKVMIQSTTRLV-LVDFKNQSTYKTVY--KIKETIGN-ITDSAIEDIKKFANAVVIN 621

  Fly   576 GVSPNAVFVKADPGLVQRA--------KAQVPI 600
            ..|   ||..:|..|..:.        |.|:|:
plant   622 KAS---VFPNSDSFLTGQTTNVLERLQKFQLPV 651

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG9394NP_611548.1 CBM20 47..169 CDD:449530 28/136 (21%)
GDPD_GDE5 345..630 CDD:176549 61/289 (21%)
SNC4NP_001323206.1 GDPD_SHV3_repeat_1 51..352 CDD:176545 64/327 (20%)
GDPD_SHV3_repeat_2 398..698 CDD:176546 61/304 (20%)
STKc_IRAK 840..1110 CDD:270968
Blue background indicates that the domain is not in the aligned region.

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