DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG9394 and SVL5

DIOPT Version :10

Sequence 1:NP_611548.1 Gene:CG9394 / 37399 FlyBaseID:FBgn0034588 Length:679 Species:Drosophila melanogaster
Sequence 2:NP_200625.1 Gene:SVL5 / 835929 AraportID:AT5G58170 Length:750 Species:Arabidopsis thaliana


Alignment Length:457 Identity:88/457 - (19%)
Similarity:166/457 - (36%) Gaps:137/457 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly   181 FREALSLEEQPEV----------GQEKLRLRLQPVDPKTLAPILSSARANVEYVRMAYGDSKLRV 235
            || .:::...||:          |:.|.:|..:..||:.:.|     ..|.:|..:....:.::.
plant   194 FR-GINVISSPEIGFLKSIGMDAGRAKTKLIFEFKDPEAVEP-----TTNKKYSEIQQNLAAIKA 252

  Fly   236 QPEYGVPYATGDILMFHVNLEQLDRVAYL--------------VEVYAEQPDEDLVRLLGYSHLL 286
                   :|:| :|:....:..:|...||              :||||.          |:::.|
plant   253 -------FASG-VLVPKDYIWPIDSAKYLKPATTFVADAHKAGLEVYAS----------GFANDL 299

  Fly   287 HTSFSGT------------EGDVSIDLISPLWQRVVGQLRIEYLHIRPMEKDGFDLRTSFANYWR 339
            .|||:.:            .|..|:|.:...:.....|                    |...:..
plant   300 RTSFNYSYDPSAEYLQFVDNGQFSVDGVITDFPPTASQ--------------------SITCFSH 344

  Fly   340 SNWTALEIGHRGLGKSLTVTTNAAPLIENTVATMLASSEL---GADLVEFDVQLTSDLVPIIHHD 401
            .|....:.||     :|.:|.|.|. .:....|.||..:.   |||:::..||::.|.:...|..
plant   345 QNGNLPKAGH-----ALVITHNGAS-GDYPGCTDLAYQKAVDDGADVIDCSVQMSKDGIAFCHDA 403

  Fly   402 FSIRVCIDSKT-----PTSKDDL---TEVLLKDISYEQLKDLKTYQI----VGNKIVEYPAHNNV 454
            ..:.....:.|     .||..::   ..:...|:::.:::.:|. ||    ........||:.|.
plant   404 ADLTASTTAMTIFMSRATSVPEIQPTNGIFSFDLTWAEIQSVKP-QIENPFTATGFQRNPANKNA 467

  Fly   455 EPPEQRLFPTLQDF--FERVNLSTGFDIEIK----WPQQRADGLFE------SEQTLDKNLFADR 507
            ..     |.||.||  |.:....||..|.|:    ...::..|:.:      ::.||||. ...:
plant   468 GK-----FITLADFLDFSKAKAVTGVMINIENAAYLASKKGLGVVDAVKSALAKSTLDKQ-STQK 526

  Fly   508 ILAVVRRHGCGRLNVIKSFDADLCSLLRFKQHMYPVLFLSSSKENVFNDPRTSTVEQSVNFAQAF 572
            :|             |:|.|:   |:|...:.:.|...:.|..:.:...|:.| |::...:|:|.
plant   527 VL-------------IQSDDS---SVLASFEAVPPYTRVLSIDKEIGGAPKPS-VDEIKKYAEAV 574

  Fly   573 DL 574
            :|
plant   575 NL 576

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG9394NP_611548.1 CBM20 47..169 CDD:449530
GDPD_GDE5 345..630 CDD:176549 55/257 (21%)
SVL5NP_200625.1 GDPD_SHV3_repeat_1 41..338 CDD:176545 31/187 (17%)
GDPD_SHV3_repeat_2 355..653 CDD:176546 53/247 (21%)
Blue background indicates that the domain is not in the aligned region.

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