DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG9394 and SVL1

DIOPT Version :10

Sequence 1:NP_611548.1 Gene:CG9394 / 37399 FlyBaseID:FBgn0034588 Length:679 Species:Drosophila melanogaster
Sequence 2:NP_200359.1 Gene:SVL1 / 835641 AraportID:AT5G55480 Length:766 Species:Arabidopsis thaliana


Alignment Length:442 Identity:93/442 - (21%)
Similarity:141/442 - (31%) Gaps:154/442 - (34%)


- Green bases have known domain annotations that are detailed below.


  Fly   334 FANYWRSNWTALEIGHRGLGKSLTVTTNAAPLI--ENTVATMLASSELGADLVEF---------- 386
            ||...:|.|..|              |..|||:  ....:.:|..|.|  |...|          
plant    34 FAQRSKSPWQTL--------------TGDAPLVIARGGFSGLLPDSSL--DAYSFVSQTSVPGAV 82

  Fly   387 ---DVQLTSDLVPIIHHDFSIR-------VCIDSKT-------PTSK--------DDLTEVLLKD 426
               |||||.|.:.:...|..:.       |....||       ||..        .|||:|:||.
plant    83 LWCDVQLTKDAIGLCFPDVKMMNASNIQDVYPKRKTSYLLNGVPTQDWFTIDFNFKDLTKVILKQ 147

  Fly   427 --ISYEQLKDLKTYQIVGNKIVEYPAHNNVEPPEQRLFPTLQDFFERVNLS-TGFDIEIKWPQQR 488
              :|.....|..:|.|...|.:.    ..::|....|......|:.:.||| :.|.:.|. ....
plant   148 GILSRSAAFDGNSYGISTVKDIS----TQLKPEGFWLNVQHDAFYAQHNLSMSSFLLSIS-KTVI 207

  Fly   489 ADGLFESEQTLDKNL----------FADRIL-------AVVRRHG--CGRLNVIKSFDADLCSLL 534
            .|.|...|....:|:          |..|.|       :..:.:|  .|.|..:|:|.:   .:|
plant   208 IDYLSSPEVNFFRNIGRRFGRNGPKFVFRFLEKDDVEVSTNQTYGSLAGNLTFLKTFAS---GVL 269

  Fly   535 RFKQHMYPVLFLSSSKENVFNDPRTSTVEQ---------SVNFAQAFDLG---GVSPNAVFVK-A 586
            ..|.:::|:       |:.:..||||.|:.         :..|...|||.   ...|.|.::. .
plant   270 VPKSYIWPI-------ESQYLLPRTSFVQDAHKAGLEVYASGFGNDFDLAYNYSFDPLAEYLSFM 327

  Fly   587 DPG------------------------LVQRAKAQVPIV----------------LLWGSDLKD- 610
            |.|                        |...|.:||..:                |.:...:|| 
plant   328 DNGDFSVDGLLSDFPLTASSAVDCFSHLGSNASSQVDFLVISKNGASGDYPGCTDLAYTKAIKDG 392

  Fly   611 RESIDWFLQQGPTGVIYDRLDLWLG----------ANRTSAFEAEQDLPGYF 652
            .:.||..||....|:.:....:.||          .||::.......|||.:
plant   393 ADVIDCSLQMSSDGIPFCLSSINLGESTNVVQSPFRNRSTTVPEIGSLPGIY 444

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG9394NP_611548.1 CBM20 47..169 CDD:449530
GDPD_GDE5 345..630 CDD:176549 82/397 (21%)
SVL1NP_200359.1 GDPD_SHV3_repeat_1 50..348 CDD:176545 67/314 (21%)
GDPD_SHV3_repeat_2 365..667 CDD:176546 15/80 (19%)
Blue background indicates that the domain is not in the aligned region.

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