DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG9394 and Gdpd4

DIOPT Version :10

Sequence 1:NP_611548.1 Gene:CG9394 / 37399 FlyBaseID:FBgn0034588 Length:679 Species:Drosophila melanogaster
Sequence 2:XP_006229858.1 Gene:Gdpd4 / 680990 RGDID:1585799 Length:739 Species:Rattus norvegicus


Alignment Length:290 Identity:53/290 - (18%)
Similarity:94/290 - (32%) Gaps:119/290 - (41%)


- Green bases have known domain annotations that are detailed below.


  Fly   348 GHRGLGKSLTVTTNAAPLI--ENTVATMLASSELGADLVEFDVQLTSDLVPIIHHDFSIRVCIDS 410
            ||||           ||::  |||:.:...:.|.|...:|.|:.::.|.||.:.||:.:      
  Rat   279 GHRG-----------APMLAPENTMMSFEKAVEFGVSGLETDIYVSVDHVPFLMHDYDL------ 326

  Fly   411 KTPTSKDDLTEVL-------LKDISYEQLKDLKTYQIVGNKIVEYPAHNNVEPPEQ--------R 460
               |...::.|||       ..:.::..|..|.    .|...:::.....::|..:        :
  Rat   327 ---TRTTNIIEVLPSAASNHSSNFNWTFLSSLN----AGQWFLKHKPFFGMKPLSEADQKRAGNQ 384

  Fly   461 LFPTLQDFFE-------------------------------RVNLST-----------GFDIE-I 482
            ..|.|.:|.|                               ||.|.:           |||.| :
  Rat   385 SIPQLSEFLELAKREEKIVLFDLFGPPPGHPLRNTFVRRVVRVILDSKIEQRLIFWLPGFDREYV 449

  Fly   483 KWPQ---QRADGLFESEQTLDKNL--------------FADRILAVVRRH-------------GC 517
            |:..   |....|:..|:...||:              ..|...|.:..|             .|
  Rat   450 KYMAPGFQHVGRLWSIEELTQKNISIINVDYKRLFYSGLRDYKKAKIYIHVYVINEPWLFSLAWC 514

  Fly   518 GRLNVIKSFDADLCSLLRFKQHMYPVLFLS 547
            ..:|.:.:.:.:|.|     |..:|:.|::
  Rat   515 SNVNSVTTDNIELLS-----QLSHPLFFMT 539

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG9394NP_611548.1 CBM20 47..169 CDD:449530
GDPD_GDE5 345..630 CDD:176549 53/290 (18%)
Gdpd4XP_006229858.1 PI-PLCc_GDPD_SF 253..566 CDD:472694 53/290 (18%)
Blue background indicates that the domain is not in the aligned region.

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